Terrihabitans soli: IZ6_19230
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Entry
IZ6_19230 CDS
T07468
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
tso
Terrihabitans soli
Pathway
tso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IZ6_19230 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tso03021
]
IZ6_19230 (rpoA)
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_19230 (rpoA)
Enzymes [BR:
tso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IZ6_19230 (rpoA)
Transcription machinery [BR:
tso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IZ6_19230 (rpoA)
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IZ6_19230 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF211
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
BCJ91188
UniProt:
A0A6S6QXB0
LinkDB
All DBs
Position
complement(1863849..1864865)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQDLIKPNKLDVSAGRDPQRFTTVVAEPLERGFGVTLGNALRRVLLSSLQGAAVT
SVQIDGVLHEFSSIAGVREDVTDIVLNIKDIAIRMQGEGPKRMTLRKQGPGAVVAGDIQV
TGDVAILNPDLVLCHLDEGADIRMEFTIDTGKGYVPADRNRAEDAPIGLIPVDSLYSPVR
QVSYKVENTREGQILDYDKLTLTIETDGSVTPDDALAYAARILQDQLEVFVNFEEPKKAE
ERTAIPELAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEVSGWPPENIEELAKRFEEHY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
gtgatccagaagaactggcaagacctcatcaagccgaacaagctcgacgtgagcgccggc
cgcgacccgcagcgtttcacgaccgtcgtcgctgaaccgctcgagcgcggcttcggcgtg
acgctcggcaatgctctgcgtcgcgtgctcctgtcttcgctgcagggagccgcggtgacg
tcggtgcagatcgacggcgtgctgcatgagttctcctcgatcgccggcgtccgcgaagac
gtcaccgacatcgtcctgaacatcaaggacatcgccatccgcatgcagggcgagggcccg
aagcgcatgacgctgcgcaagcagggtccgggcgcggtcgttgcgggcgacatccaggtg
accggcgacgttgcgatcctgaaccccgatctcgtcctgtgccatctcgacgaaggcgcg
gacatccgcatggaattcacgatcgacaccggcaagggctatgtcccggccgaccgcaac
cgcgccgaagacgcgccgatcggcctgatcccggtcgactcgctctattcgccggtccgt
caggtttcctacaaggtcgagaacacccgcgagggccagatcctcgactatgacaagctg
accctgacgatcgaaaccgacggttcggtcacgccggacgacgcgctcgcttatgccgcg
cgcatcctgcaggaccagctcgaagtgttcgtgaacttcgaagagccgaagaaggccgaa
gagcgcaccgccattccggagctcgccttcaacccggccttcctcaagaaggtggacgaa
ctcgagctttctgtgcgttcggcgaactgcctgaagaacgacaacatcgtctatatcggc
gacctcgtgcagaagaccgaggcggaaatgctccgcactccgaacttcggccgcaagtcg
ctgaacgagatcaaggaagtgctggctcagatgggcctgcacctcggcatggaagtgagc
ggctggccgccggagaatatcgaagagttggccaagcgcttcgaagaacattactga
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