Terrihabitans soli: IZ6_21320
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Entry
IZ6_21320 CDS
T07468
Symbol
pcrA
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tso
Terrihabitans soli
Pathway
tso03420
Nucleotide excision repair
tso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IZ6_21320 (pcrA)
03430 Mismatch repair
IZ6_21320 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_21320 (pcrA)
Enzymes [BR:
tso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IZ6_21320 (pcrA)
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IZ6_21320 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
IZ6_21320 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BCJ91397
UniProt:
A0A6S6QTX6
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All DBs
Position
2070624..2072999
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AA seq
791 aa
AA seq
DB search
MADPNTVPFFDDDDAPQGGIAARASAGVMRSRMSGGDYLEGLNPEQRDAVLTLDGPLLVL
AGAGTGKTRVLTTRIAHILATGRARPQEILAVTFTNKAAREMKHRIATLVGDVATGMPWL
GTFHSIGATMLRRHAELAGLKPSFTILDTDDQIRLIKQILSAENIDEKRWPARNLAWAID
GWKNRGLTPKDVPPGDGALFANGKGKELYAAYQERLRVLNAVDFGDLLLEPIRIFRDHAD
VLAIYHQRFKFMLVDEYQDTNVAQYLWLRLLAQGPRNLCCVGDDDQSIYGWRGAEVDNIL
RFDKDFPGAKVIRLERNYRSDAHILGAASHLISHNKDRLGKTLRPQGEDGERVTVSGAWD
SGEEARSIGDEIENLQRKGDSLNSMAILVRASFQMREFEDRFVTLGLDYRVIGGPRFYER
QEIRDALAYLRCINSSADDLAFERIVNVPKRGLGDATVQTLNNIARGARISLMEAARMVT
DSEELKPKPRESLRVLTQNFTRWAQAADHMKHTELAEMVLDESGYTEMWRQDRSPDAAGR
LENLKELVRSMEQFENLQGFLEHVSLVMDAESGENVDAITLMTLHGAKGLEYDTIFLPGW
EEGLFPSQRTMDEHGAAGLEEERRLAYVGITRARRRAKIYFATNRRIHGQWQSSIPSRFL
DELPEEHVEVVEAPAAFSNRGFGESRFDRLEPFGGSTYDTPGWQRAQQRKQAGGFQERGA
GFNARRGGPMVIEGELVAKSTSNAASYGIGERVFHDKFGYGEVLEVEGNKLLVAFDKAGH
KRVIDSFVKRP
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
ttggccgatcccaacaccgtcccgtttttcgacgatgacgacgccccgcagggcggcatc
gccgcgcgcgcttcggccggggtcatgcggagccggatgtcgggcggcgattatcttgag
ggcctgaaccccgaacagcgcgatgcggtgctgacgctggacggtcccctcctcgtcctc
gcgggcgccggcaccggcaagacgcgcgtcctcaccacccgcatcgcccatatccttgcg
acagggcgcgcgcggccgcaggaaattctcgccgtcaccttcaccaacaaagcggcgcgc
gagatgaagcaccgcatcgccactctggtcggcgatgtggcgaccggcatgccgtggctc
ggcacgtttcactccatcggcgcgaccatgctgcgccgccatgccgagcttgccgggctg
aagcccagcttcaccattctcgacaccgacgatcagatccggctgattaagcagatcctc
tcggcggaaaacatcgacgagaagcgctggccggcgcgcaatctcgcctgggccatcgac
ggctggaaaaaccgcgggcttaccccgaaggatgttccgcccggcgacggcgcgttgttc
gccaacggaaaaggcaaggagctgtacgccgcctatcaggagcgcctgcgtgttctgaac
gccgtcgatttcggcgatcttctgctcgagccgatccgcatcttccgcgaccatgcggat
gttctggcgatatatcaccagcgtttcaaattcatgctggtcgacgagtatcaggatacg
aacgtcgcccaatatctgtggctgcgcctgctcgctcaaggcccacgcaatctctgctgc
gtcggcgacgatgatcagtcgatctatggctggcgcggcgccgaggtcgacaacatcctg
cgcttcgacaaggatttcccgggcgcgaaagttattcgcctggagcgtaattaccgctcc
gacgcccatattctcggcgcggcctcgcacctcatttcgcacaacaaagaccggctcggc
aaaacgctgcgcccgcagggcgaagacggcgaacgcgtcaccgtctccggcgcgtgggat
tcgggcgaggaagcgcgctccataggcgatgagatcgaaaatcttcagagaaaaggcgac
agcctgaactcgatggcgatccttgtccgcgcctcgttccagatgcgcgaatttgaagac
cggttcgtcacgctcggcctcgattatcgcgtcatcggcggaccgcgcttctatgagcgc
caggaaatccgcgacgccctcgcctatcttcgttgcatcaactcctcggcggacgacctt
gcgttcgagcgtatcgtcaacgtgcccaaacgcgggctgggcgatgcgacggtgcagaca
ctgaacaatatcgcccgcggcgcgcgcatctcgctgatggaagcggcgcgcatggtgacg
gattcggaagagctgaaacccaagccgcgcgagagcttgcgcgtcctgacgcagaatttc
acgcgctgggcgcaggccgctgatcatatgaagcacaccgagcttgccgaaatggtgctc
gatgagagcggttataccgagatgtggcggcaggaccgctcgccggatgcggcgggccgt
ctcgaaaacctcaaagaactcgtccgctccatggagcagttcgaaaacctgcaaggtttt
ctggagcatgtctcgctggtgatggatgccgagagcggcgagaatgtcgatgcgattact
ttgatgacgctgcacggcgccaaagggctcgaatacgacacgatcttcctgcccggctgg
gaagaaggcctgttccccagccagcgcaccatggatgaacatggcgcggccgggctcgag
gaagagcgccgccttgcctatgtcggcatcacgcgcgccagaaggcgcgccaaaatctat
ttcgccaccaaccgccgcattcacggccagtggcaatcgtccataccttcgcgttttctc
gacgagcttccggaagagcatgtcgaagtggtcgaagcaccggcggcgttttcaaaccgc
ggcttcggcgaaagccgcttcgaccggctggagcccttcggcggctcgacctatgacacg
ccgggctggcagcgcgcgcagcagcgcaaacaggcgggcggctttcaggagcgcggcgcg
ggcttcaacgcacgccgcggcgggccgatggtgatcgagggcgaactcgtcgccaaatcc
acgtccaacgccgcaagctatggaattggcgagcgcgtgttccacgacaaattcggctat
ggcgaggttctcgaagtcgagggcaacaaacttctcgtcgccttcgacaaagccgggcat
aagcgcgtcatcgatagtttcgtcaaacgtccctga
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