Terrihabitans soli: IZ6_25590
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Entry
IZ6_25590 CDS
T07468
Symbol
rtcB
Name
(GenBank) RNA-splicing ligase RtcB
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
tso
Terrihabitans soli
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tso03016
]
IZ6_25590 (rtcB)
Enzymes [BR:
tso01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
IZ6_25590 (rtcB)
Transfer RNA biogenesis [BR:
tso03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
IZ6_25590 (rtcB)
Prokaryotic type
tRNA splicing ligases
IZ6_25590 (rtcB)
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Paralog
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GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BCJ91824
UniProt:
A0A6S6QMV3
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All DBs
Position
2459962..2461155
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AA seq
397 aa
AA seq
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MVEVRRLENGMIKLWTEGVPVEDGAMQQLEQVASLPFIFGHVAVMPDVHYGLGATIGSVI
PTKGAVVPAAVGVDIGCGIAGWRTGLRAENLPHLPELRNRIERAIPHGRTNNGGPGDRGA
WEHPPASVRANWHNLFPEYELLVEATPALETRRSPIYQLGTLGTGNHFIELAVDQDDHVW
ILLHSGSRGAGAAIANHYVAEAKRLCAAWHVNLPNPDLAFFPEGSDEFDAYLEATIWAQG
YAAINRELMLQAVWDLLDRPIILEKVETPHNFVARENHKGQNVLVTRKGSSRARKGDRIV
IPGSMGAKSYIVTGKGNPESFNSCSHGAGRAMSRTAARKSISMEDHLANISHVECRKTED
LLDESPAAYKDIDAVIAAQSDLIEVTHTLRQVLNVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaagttcgacgcctcgaaaacggaatgattaaactctggaccgagggcgtgccc
gtcgaagacggcgctatgcagcagctcgaacaggtggccagcctccccttcatcttcggc
cacgtcgcggttatgcccgacgttcattatggccttggtgccaccatcggctccgtgatc
ccgacgaagggcgctgtagtcccggccgcggtcggcgtcgacatcgggtgcgggatcgcc
ggctggcgcacgggtctccgtgctgagaacctgccgcacttaccggaactccggaacagg
atcgagcgagccatcccgcatggtcgcacgaataacggcggccccggcgaccggggagcg
tgggaacaccctccggcgtcggttcgcgccaattggcacaacctgtttccggaatatgaa
ctactggtcgaagcaactccggcactggaaacccgccggagcccgatctatcagctcggt
acgctcggaaccggcaaccacttcatcgagctggccgtcgatcaggacgatcatgtctgg
atcttgcttcactcggggagccgcggtgcgggggcggcaattgcaaaccactacgtggca
gaggccaagcgcctctgtgccgcgtggcacgtcaatctgccgaaccctgatcttgcgttc
ttcccggaaggctcggacgaattcgacgcctacctcgaagcgacgatctgggctcagggt
tatgccgcgataaatcgtgagctgatgctccaagcggtctgggaccttctcgaccgaccg
atcatcctcgaaaaggtcgagactccccacaacttcgtggctcgtgagaaccacaagggt
cagaacgtcctagtcacgcggaagggctcgtcacgggctcgcaagggtgaccggattgtc
atccccggctcgatgggcgcgaaatcgtacatcgtcaccggcaaaggtaatccggagtcg
ttcaactcctgctctcacggcgccggccgagctatgtcccgcacggcagctcgtaaatcg
atcagcatggaagaccatcttgcgaatatctcgcacgtcgagtgccgcaagacggaagac
ctgctcgacgagagcccggccgcttacaaagacatcgacgcggttatcgcggcgcagtct
gacctcatcgaggtgacccatacccttcgtcaggttctgaacgtcaaaggatga
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