Terrihabitans soli: IZ6_28520
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Entry
IZ6_28520 CDS
T07468
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
tso
Terrihabitans soli
Brite
KEGG Orthology (KO) [BR:
tso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tso03400
]
IZ6_28520
Enzymes [BR:
tso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IZ6_28520
DNA repair and recombination proteins [BR:
tso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
IZ6_28520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
BCJ92117
UniProt:
A0A6S6QW05
LinkDB
All DBs
Position
2770422..2773502
Genome browser
AA seq
1026 aa
AA seq
DB search
MREAQPDALRRRPRLLTIPAGVPFLECLAQSVLEGRLGAAPGDALALADTQIFLPTRRAV
RELQTIFAQKLGGAAVLPNISALGDFDEDEGAFDTDPDEYGLPEAIGETERRLVLAQLIR
GWAVGVARAIGTGGTEADLISTTPSEAIALAIELGQLIDSFETEGAKWTELAPLIPPEHD
EVWRITADFLDVAATAWPAVLDERGKIGDAALRNLRLRTKAARFEHDVPHTPVIIAGSTG
SNPATADLMRAVGLLPNGAVVLHGLDVEADEETWKEIGGNDAALPQHWTHPQHAFFRLLK
RLGVERDEVGMLGRETRTGDARRALVAGALLPSELTDRWSATRLDAGRALDGMTLIEAAN
EREEALAIALALTETLREPDRTAALITPDRNLARRVANELKRWDIEAEDSAGLPLADSEA
GVLARLITEAAANQLSPEALLPLLRHPDARFGMEGTTLADAVDTLEIAVLRGPVPPPGVE
GLRSALNLAHTPPDAEETRFWHPAKKRLAAEKFTPANNLISRIGRALEPLCALGTGDVPL
SALLGAHRAALLAVAADAPDDPDLKTLDSFFEEAAHHARLGVRLTDYPSVFRSLLRGETA
RGTHAAHPRLRILGTLEARLLGFDRVVLGGLNETIWPPQTKNDAFLSRPMRGALGLPPPE
WRIGQAAHDFEQALGTRDVILTRAQKAGGAPSVAARWLQRLAALAGDNWKTAQQRGAFYL
SAARALDDAPVERRGAPAPTPERDLRPSRLSVTEIETLIRDPYAIFAKHTLRLQPLDPLG
AEPGASDRGNIIHKAVATFVEKHDPDAPDALEKLIALGREGFDPFWSFPDVRAIWWPRFE
NIASWFIAWESARRKTIKRTLTERKGLLDWQTREDRTFTLSGRADRLDEFPDGRFAVVDY
KTGVLPGHTEVQVGMAPQLPLEAALLAHGKFEGAQGETSQYLYVQLTGRGDGGDEKLIVL
KETTPAEVAAAALTDLKKMIDRFENEATPYRPGTHPKFRRRPNGDYDHLARFAEWLLAPD
APEDFS
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagcacagcctgacgctctgcgccgccggccgcgccttctgaccattcccgcc
ggtgtgccctttctcgaatgccttgcgcagtcggtgctcgaggggcggctcggcgcggct
ccgggcgatgcgctcgctttggccgatacgcagattttcctgcccaccaggcgtgcggtg
cgcgagctgcagacaatctttgcgcaaaagctcggcggcgcggcggtcttgccgaacatt
tccgcgctcggcgatttcgacgaagacgaaggcgcgttcgacaccgatcccgatgaatat
ggattgcccgaagccatcggcgagacggaacgacggcttgttcttgcgcagcttattcgc
ggctgggcggtgggcgtcgcgcgcgccatcggcaccggcggcaccgaggccgatctgatt
tcaacgacaccgtccgaggccatcgcgcttgcgatcgaactcggccagctgatcgacagt
ttcgaaaccgaaggcgcgaaatggacggaacttgcgccgctcattccgcccgaacatgac
gaagtctggcgcatcacggcagacttcctcgacgtcgcggcaaccgcctggcctgcggtt
ctcgacgaacgcggcaagataggcgacgcggccctgcggaatttgaggctccgcaccaag
gccgcgcggttcgagcacgatgttccacacacaccggtcatcatcgcgggttcgacgggc
tcgaacccggcaaccgccgatctcatgcgcgccgtgggcctcttgccgaacggcgccgtg
gttctgcacggcctcgatgtcgaagccgacgaagaaacctggaaagagatcggcggcaac
gacgccgccctgccgcagcactggacgcatccgcagcacgccttcttccgcctgttaaag
cggctcggcgtcgaacgcgacgaagtcggcatgctcggccgcgaaacacgcaccggcgat
gcgcgccgcgcgctcgttgccggcgcgcttctgccgtccgaactcaccgaccgctggtcc
gcaacgcgcctcgatgccggccgcgcgctggacggcatgactttgatcgaagccgccaat
gagcgcgaggaagcgctggcgattgcgcttgccttgacggaaaccctgcgcgagccggac
cgcaccgcggctttgatcacacccgaccgaaatcttgcgcgccgtgtcgcaaacgaactc
aagcgctgggacatcgaggcggaagacagcgcgggtcttcctctcgccgacagcgaagcg
ggggttcttgcgcgtctcatcactgaggccgcagcaaaccagctttcacccgaagcgttg
ctgccgctgctgcgccatcccgatgcacgtttcggcatggaggggacaacgcttgcggac
gctgtcgatacgctggaaatcgccgtgctgcgcggccccgtcccgccacccggcgtcgaa
gggctgcgctcggcgctcaatctcgcgcatacgccgcccgatgcggaagaaacgcgtttc
tggcatccggccaaaaaacgcctcgccgccgaaaagttcacaccggcgaataatctcatc
tcgcgcatcggccgcgcgcttgaaccgctctgcgcgctcggcacgggcgatgtgccgctg
tcggcgcttctcggcgcgcaccgtgcggcgcttcttgccgtcgccgccgacgcgccggac
gatcccgatctgaaaacgctcgacagcttttttgaggaagcggcgcatcatgcgcggctc
ggcgtcaggctgacggattatccttccgtcttccgctcgcttttgcgcggcgagacggcg
cgcggcacccatgcggcgcatccgcgccttcgcattctcggcacgctcgaagcgcgcctt
ctcggtttcgaccgcgttgtgctcggcgggctgaacgaaaccatctggcccccacagacg
aagaacgatgccttcctgtcgcggccgatgcgcggcgcgctcggcctgccgccgccggaa
tggcgcatcggccaggcggcgcacgatttcgaacaggcgctcggcacgcgcgacgtcatc
ctgacgcgcgcacagaaagccggcggtgcgccgagcgtggccgcgcgctggctgcaaagg
ttggcggcgctcgcaggcgataactggaagacggcgcagcagcgcggcgcattctatctc
tccgctgcgcgcgccctcgacgacgcccccgtggaacgccgcggcgcccccgcgccgaca
cctgagcgcgatcttcgtccttcgcgtctcagcgtcaccgagatcgaaacgctgatccgc
gatccctatgcgatttttgcgaagcacacgctgcgccttcagccgctcgacccgctcggc
gccgagcccggcgcctccgatcgcggcaatatcattcacaaggccgtcgccacctttgtc
gaaaaacacgatccggatgcgccggatgcgctcgagaaactgattgcgctcggccgcgag
ggcttcgatccgttctggagctttccggatgtgcgcgccatctggtggccgcgcttcgaa
aacatcgcctcctggttcatcgcctgggagagcgcacggcgcaaaacgatcaaacggact
ttgaccgagcgcaaaggcctgctcgactggcagacgcgcgaggaccgcaccttcactctg
tccggacgcgccgaccggctcgacgagtttcccgatggaaggtttgcggttgtcgattac
aagaccggcgttctgccgggccataccgaagttcaggtcggcatggcgccgcagctgcct
ttagaggcggcgctgctggcgcacggaaagttcgaaggcgcgcagggtgagacctcgcaa
tatctctatgtgcagctgacggggcgcggcgacggcggcgacgagaagctgatcgtgctg
aaggagacgacgcccgccgaagtcgccgcggcggcgctgaccgatctcaagaagatgatc
gaccggtttgagaacgaagcgacgccctatcgccccggcacgcatccgaagttccgtcgc
cgtccgaacggcgattacgatcatctggcgcgctttgccgaatggctgctcgcgccggac
gcgccggaggatttctcgtga
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