Trichinella spiralis: Tsp_00047
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Entry
Tsp_00047 CDS
T01609
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 11
KO
K03036
26S proteasome regulatory subunit N6
Organism
tsp
Trichinella spiralis
Pathway
tsp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
Tsp_00047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsp03051
]
Tsp_00047
Proteasome [BR:
tsp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
Tsp_00047
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPN6_N
PCI
RPN6_C_helix
Motif
Other DBs
NCBI-GeneID:
10901341
NCBI-ProteinID:
XP_003375869
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MNDVERNFEVETGESESRAKNMAGAAEVEIFLAEVHKDEKNAIRHLTNFVTNTTSQDNEE
ELKKKEEVIMQCGNILAREKLTEALKEMIQRTRPFLISLGKAKAAKLVRNLVDLFCSIEM
NGTPAEAKNFQDIKVELCRECIQWAREQSRIFLRQTLEARLVKLFNEIEDFQNALNLAVT
LVKELKKLDDKELMVEVQLEESKACYEMGNLTKARAALTSARTTANAIYVSPRMQAALDM
QSGILHAADERDFKTAFSYFYEAFEGYDVLNLPEALRALKYMLLCKIMLNLPDDVHILVQ
GKLGMKHAGRQLEAMKAVATASKERSLSDFKEACGKFNEELQSDRVVKSHFQSLYDSMLE
KNLCRIIDPYSRLEISFIQQVEKKLSQMILDKVLYGILDQGEGILETFEVDEEDEAYALA
IEAVHGLNEVCDILYRKANKLN
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacgtagaaagaaattttgaagtcgagacaggagagagtgaaagcagagcgaaa
aatatggcaggcgctgctgaagtggaaatttttttagctgaagtacacaaagatgaaaaa
aatgcaattcgtcatttgacgaattttgtgacgaacactacgtcacaagacaatgaagaa
gaacttaagaaaaaagaagaagtaattatgcagtgtggtaatattttggcaagagaaaag
ttaactgaagcattaaaagaaatgattcaacgaactcgaccttttttaatttccctcgga
aaagccaaggcagcaaaattggttcgtaatttggttgatttgttttgtagcattgaaatg
aatggtactcctgcagaagcgaaaaatttccaagatatcaaggttgaactttgcagagaa
tgcattcaatgggctcgtgaacagagtcgcatttttttgcgccaaactctcgaagcaaga
ctggtgaaattgttcaacgaaattgaagatttccaaaacgctctcaatttagcggttact
ttggtgaaagaattgaaaaagctcgacgacaaagaattgatggtcgaagtgcagttggaa
gagagcaaagcttgttatgaaatgggaaacttgacaaaagcaagagccgccctaacttca
gcccgaactaccgctaatgccatttacgtatcacctagaatgcaagccgctctagatatg
cagtcaggaattcttcatgcggctgatgagcgcgattttaagacagcattttcgtatttc
tatgaagcttttgaaggctatgacgttttgaatcttcccgaagcattgcgcgctttgaaa
tacatgctgttgtgcaaaattatgcttaaccttcctgatgacgttcacattcttgttcag
ggaaagttaggaatgaaacatgccggtagacaacttgaagcgatgaaagccgttgctact
gcttccaaagaacgctcgttgtccgatttcaaagaagcatgcggaaaatttaacgaagaa
ttgcaaagtgaccgtgtggtgaagtctcattttcaatcgttgtatgacagtatgctagag
aaaaatttatgccgaataatcgatccttattctcgtcttgaaatcagtttcattcagcaa
gttgaaaagaaattatctcaaatgatactagacaaagtactgtacggtatattagatcaa
ggggaaggtattttggaaacttttgaagttgatgaagaagatgaagcttatgcgttggct
attgaagcggtccacggtttaaatgaagtttgcgacattttgtatcgaaaagccaacaag
ctgaactaa
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