Trichinella spiralis: Tsp_00151
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Entry
Tsp_00151 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K13174
THO complex subunit 5
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_00151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_00151
03041 Spliceosome [BR:
tsp03041
]
Tsp_00151
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Tsp_00151
Spliceosome [BR:
tsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Tsp_00151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
bZIP_1
AAA_16
Motif
Other DBs
NCBI-GeneID:
10901425
NCBI-ProteinID:
XP_003375952
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MALPDQEQDSQSENDVQIFFEKEDQDASSADASAFTAEFHQIIEHLLMRMSTDKSTLSID
EVQENNLVSVALLKQLNRLFQYKNSILKEELQKVIKEVEQKFAKLQNAQQEVSLIVKEKE
HHLNFRALFSNEFDDFRDFSSDDQKIALLPLEQFFAEACTDESKKELIEKCPQELHTARL
AWELETRKRLGEEIKQLEELNKKIIAENSSLKKKLDEFNPLLLSVIKAVRPLQELVGWDS
NNDTLFQERLQHLPRPLFFIFMQIIAFNDIHDEKISVNIKGDLTKLAVNLARSSSLQEME
SDTTDGEMLTSVEDESRVEEEKRMQENLREYHLSVHPLSVQLEIALDNGCVLSLKLQYLT
GLKLLSVHTNVQLPNEASSARFSHFLFNESLLDFLFPNDSGTTCPDVAMAAKLQYYKCLF
HFAILFQPRIDISEEIETIGRMYFWLQRLGNLVPVTQQRSDVTVMREDLNLSDLNISDSL
DFLFTVIAAMKRRMRIRFSLLQQLISMWSLELKYPDSVASWSSVASAVEFVSWRCATITK
RRSDSVKTMQLEVLLAVSCKYPDVAPKLFFCFSKNSDKYTSFNNEIVRAMERHVNFVCIK
KIPPEYKDEVLSVQFKCVPILMHLALHLNFGIDENRDSLIDNLLPNMHRGRDREPPLACV
DQRTNLFRTFPDAAIKDASGGHSSLISDKNYITTFNLEKWKAI
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggctcttccagatcaagaacaagattcacagtcggaaaatgatgttcagatttttttt
gaaaaagaagatcaagatgcttccagtgccgatgctagtgcatttacagcggaatttcac
cagatcattgagcacttgctcatgcgaatgtcgacagacaagagcacactgtccattgat
gaagtgcaagagaacaatctcgtcagtgtggcattgttgaagcagctgaatcgtttattt
caatataagaacagcattttaaaagaagaattgcaaaaggtaatcaaagaggtggaacag
aagtttgctaagctgcagaatgctcaacaagaagtatctttaatagtgaaagaaaaggag
catcatttgaactttagagcattattttcgaatgaatttgatgatttccgtgatttcagc
tctgatgatcagaaaattgcattacttccactggagcagttctttgctgaagcttgtaca
gatgagtcgaaaaaagaattgatcgaaaagtgtccccaagagttgcacactgcccgttta
gcgtgggaattggaaacacggaagagattaggagaagaaatcaaacaacttgaagaactg
aataaaaaaataatagccgaaaattcttctttgaagaaaaagttggatgaatttaatccg
ctgttgttatcggttattaaggccgttcgtccgctgcaagagctggtcggttgggattcg
aataatgacactctgtttcaagagcgcttgcaacacttaccacgaccattgttttttatt
tttatgcaaattattgcattcaatgatatacatgatgaaaaaatatccgttaatattaaa
ggcgatttgacgaagcttgctgtcaacttggcacggtcgtcttcactgcaagaaatggaa
tccgatacaacggatggggaaatgttgaccagcgttgaagatgaaagtcgcgttgaagag
gagaagcgaatgcaagagaatttacgtgaatatcatttatcagtgcatccattgtctgtt
caattagaaattgcactggataacggatgtgttctttcgttgaaattgcaatacttgact
ggattgaaattactcagcgtccacaccaacgttcagttgcccaatgaagcatcttctgcg
cgtttttcgcattttttattcaatgaatcattgttggattttctatttccaaatgattct
ggcactacatgtccagacgtggcaatggctgctaaacttcaatattacaaatgtttgttt
cattttgccattcttttccaacctagaattgatatttctgaagagattgaaactattggg
agaatgtatttttggttgcaacgtttgggcaatctggtgcccgtgacgcaacaacgttcc
gatgtgaccgtgatgagggaagatttgaatttaagcgatttgaacatcagcgattcgttg
gattttctattcaccgtcatagctgcaatgaagagaagaatgagaataagattctctctg
ttacaacaattgatatccatgtggtcgttggaattgaaatatcccgacagtgtggcatct
tggtcttcagttgccagtgcagttgaatttgtatcgtggcgttgtgcaacaatcacgaag
cgacgaagcgacagtgtgaaaacaatgcaactcgaggtgctgcttgcagttagctgtaaa
tatcctgatgtagcaccaaagctatttttttgtttttccaaaaattccgacaaatataca
agttttaacaatgaaattgttagagctatggaacgacatgtgaactttgtgtgcatcaag
aaaatccctcctgaatataaagacgaagttttatctgttcaatttaaatgcgtaccgatt
ttgatgcacctagcattgcacttgaattttggaattgacgaaaatagagactccctcatt
gataatctattgcccaacatgcatagaggacgtgatcgtgaaccaccacttgcctgcgtt
gatcagcgtacgaatctttttcgaacatttccggatgcagcaataaaagatgcctccgga
gggcattcatctctgatttctgataaaaattacatcacaacgttcaacctggaaaaatgg
aaagctatttga
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integrated database retrieval system
