Trichinella spiralis: Tsp_00223
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Entry
Tsp_00223 CDS
T01609
Name
(RefSeq) splicing factor, arginine/serine-rich 10
KO
K12897
transformer-2 protein
Organism
tsp
Trichinella spiralis
Pathway
tsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tsp_00223
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_00223
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_00223
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Tsp_00223
Spliceosome [BR:
tsp03041
]
Common components
Common spliceosomal components
SR proteins
Tsp_00223
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RSRP
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
10901492
NCBI-ProteinID:
XP_003376018
LinkDB
All DBs
Position
Unknown
AA seq
448 aa
AA seq
DB search
MRQYYDVQVVIDYGITRCSFSVVSVAVFLRRLSECQWRFLTRLWWMMRLFQIIIRPTTDA
LELRVAARQGPLPVRDRLLDHAPLLGHGKAFQLSTFKTRSRSRDRRRNKRSRSSSRDRRR
RRSRTRSISRSRSRDRGRHGRRRSKSRSPMSNRKRHLAPRENPPTSRCLGVFGLSLYTTE
RDLHQLFSRYGKVDDVQLVYDHPSGRSRGFGFVYFDTVDDAVLARERAAGTEIDGHRIRI
DFSITKRPHTPTPVAAVTEMIIIVEGRHRRTIIVDVHVRTPTVLDCCIEKTLSEVIEAVM
VEGAFGSCALTDLESSVYVEFSKCFYKAWHLFKTCPCSESLKIFISKFFIVFQEVLCTVP
SKLSSNICENQYLSGRVLNEPEMDCSKIVVTVYTTVVQYCTDIAYHKSQDRIVRLDKAAN
SRDKPLLALKVIYCNSEIVTFFDWKYLH
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatattatgatgttcaagttgttattgattacggtattacacgttgttcattc
agtgttgtcagtgtggcggtttttctgcgcaggctctcggaatgtcagtggagatttcta
acgaggttgtggtggatgatgagattgtttcaaatcatcattcggccaacaacagacgct
ctcgaactcagagtcgcagctcgacaaggaccccttcccgttcgcgatcgtttactagat
cacgcaccgctactcggtcacggtaaggcatttcagttgtcaacatttaaaactcgttct
cgaagtcgagaccgacgtcgaaacaagcgcagcagatcatcttcccgtgaccgtcgtcgc
cgccgctctcgtacacgatcaatttccagaagccgttctcgtgaccgaggacgtcatggg
cgtcgacgaagcaaatctcgctcacctatgtcaaatcgaaagcgtcatttagcgccgcga
gaaaatccaccaacttctcgttgtttaggcgtttttggtctaagtttgtacacaactgaa
agggatttgcatcagttgttttcgagatatggaaaagtggatgacgttcaacttgtttat
gatcatcctagtgggcgttcgcgtggttttggatttgtttacttcgatactgttgacgac
gctgtgttggccagagaacgtgcagcaggcacagaaatagatggtcatcgcataagaatt
gacttttctattactaaacgtccgcacactcctacacctgtcgccgcagttacagagatg
attattatcgtggaaggtcgccatcgccgtacaattatcgtcgacgttcacgttcgtact
cctacagtcctagactgctgtattgagaagacactctcagaagtgatagaagcagtaatg
gttgaaggcgcttttggaagttgcgcattgaccgatctggaaagcagcgtttatgtagaa
tttagcaaatgtttttataaggcttggcatttatttaaaacttgtccgtgcagtgaatca
ttgaaaattttcatcagcaaattcttcattgtattccaagaagttctctgtactgttcct
tcaaaactgtccagcaatatttgcgaaaatcaatatttaagcggtcgcgttttaaacgag
ccagagatggattgtagcaaaattgtcgtaactgtttatacaactgttgttcagtattgt
acagacatcgcttatcataaatctcaggataggatagtgcgtttggacaaagcggccaac
agccgagataaaccgcttctagccttaaaagtaatatattgtaacagtgaaattgtaaca
ttttttgattggaaatatttacactga
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