KEGG   Trichinella spiralis: Tsp_00242
Entry
Tsp_00242         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K22415  zinc finger CCCH domain-containing protein 11
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_00242
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     Tsp_00242
SSDB
Motif
Pfam: zf-CCCH_3 zf-CCCH_2 zf_CCCH_4 zf-CCCH_10 DUF6604
Other DBs
NCBI-GeneID: 10901525
NCBI-ProteinID: XP_003376051
LinkDB
Position
Unknown
AA seq 338 aa
MSLHGDDCYFFFYSKCTKGDRCPFRHSKSALGTEIVCQAWLQGRCRKAGCGYRHMKNGKT
RSTTPCYWENQPGGCLKQHCVFMHLKPRDKSLSAADYSPPPQRAKASKPRKKRTYDDGRV
WINPKLSVSVNVEDDDENANPLRGENNNMKKKAKKNNTCIEEADSQHGCFEFLIFFQGEL
ELDDLIVNDMVDDNDVKCGVSFESNAKTKFGKESDSNSERQSLDDYFREEEEKQNEEFPS
DPEADNRQPNGSENCLHGQQERAEELNNNNNDNKSCISEKKNEENVKISTDIDNDNKGQK
TNSKLGRAEYEARLLEVLGEDLAKTLAEEGIEFDLNDP
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgtctctgcacggtgatgattgctattttttcttctactccaaatgtaccaagggtgac
cgatgtccatttcgacattccaaatccgcactcggtactgaaattgtttgccaagcgtgg
ctgcagggtcgttgcagaaaagccggatgcggatatcggcacatgaaaaacggcaagacc
cgatccaccacgccctgctactgggaaaatcaacccggcggctgtttgaaacagcactgc
gtgttcatgcatctcaagccgagggacaagagtctttccgcggccgattattctcctcca
ccccagagggctaaagcttctaaaccacgtaaaaaacgtacttatgatgacggtcgcgta
tggataaatcccaaactgagcgtttcggtgaacgttgaagatgatgatgaaaatgcaaat
cccttgagaggagaaaataataatatgaagaaaaaggcgaaaaaaaacaacacttgcata
gaagaagctgattctcagcatggatgctttgaatttcttattttttttcaaggagaactt
gaacttgatgacttgattgtcaatgatatggtggacgataatgatgtaaagtgtggtgtc
agttttgaaagcaacgcgaaaacgaaatttggaaaagaatcagattcaaattcagaacga
caaagtttggatgattatttcagagaagaagaagagaaacaaaatgaagaatttccgtcg
gaccctgaggctgataatcgccaaccgaacggtagtgaaaactgcttgcatgggcagcaa
gaaagagctgaagaattgaacaataataataatgataataaatcttgcatatctgaaaag
aagaacgaagagaatgtgaaaatttccaccgacatcgataatgataataagggtcaaaaa
acgaacagtaaattgggtagagcagaatacgaagcacgcttacttgaagttcttggcgaa
gacttggcaaagacacttgccgaagaaggtattgaattcgacctcaacgatccttga

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