Trichinella spiralis: Tsp_00331
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Entry
Tsp_00331 CDS
T01609
Name
(RefSeq) putative phorbol esters/diacylglycerol binding domain protein
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tsp
Trichinella spiralis
Pathway
tsp04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
Tsp_00331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_00331
Membrane trafficking [BR:
tsp04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
Tsp_00331
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
PH_16
Ribosomal_S27
ubiquitin
C1_1
RGS-like
PHD
Motif
Other DBs
NCBI-GeneID:
10901579
NCBI-ProteinID:
XP_003376104
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MLKGSDAHADADQRIIEKMTKRIHNLEDQLNEVEKLDFEQENISLSNSGFRSHSDDLSSS
LTMKSSKCHSDDVVASSSTDDERLLTKSGNTDEIRDHQMPVSEVPPESPLLVHTLSMSNE
CDSAAVELNSSSFDEPFSKLPMLKTHLGHLAVFLHYLLSNSLGNVFGESMLQRLQAGDSA
HERKIFDALIAPHLIAFFEEAADFDQLPKRIQVIVATLATLYKHNNVKCRNAAMEKLLER
CPTYIAKEKQRFARPLLPKASRRALQIKAHCFNIAPVLQTTFCYQCQKLIWGIGAISLFC
GKCGVVLHKSCVENLAESCFGSMNLRRPLILKKIVGRKNVESSMDNIEQSIEEGKVCTAR
TDASILLKENSGEGDGSSEKNLTRNFDKSGVTNAAVSKQSAHVHNLSRSQSMNIEVAYKT
LSYECAFRKNLTEVPDVEVVIPVGEAIGSLFYCDADKTESLTRISTTESSTTVSVQDVSR
ERSPMISELDSPLTSSVSFSNTLHDIHIELDSDFKVENEIPLLEDLLDLESFQYLDKREK
NRLEVIYELFHTEQTHVRNLKILYRLFYKQLLNFNVISFEFASLLFSNLEDVLNLHVEMN
EAMKNMMQNNKLIGDISIMMLQFDGKERMRNIDSLHCQKLQSAIEALKHRVVKDQKLREF
LQVVESFPVCRKLQLKDMLPMEMQRLTKYPLLLENVLKYTEEVMTVYHLLDPSEEADRLR
TCIECSRSILESVNSAKRNAENVLRLQRLQQMLDTAQFDKVNHPIVSEFCPLDVRRFSLI
HEGPLIWRLNKSKIVDLHVVLLDEILLLLSPTSDGHLALRFHNINISCGKDEVKWTHCPL
LKLNSLIAKDVATAGLNLSWSKLKRAKSMSRKQAYVTVNQVKNPKAAIAFMKFQTVLERK
KLKQEDKLVIRLLNEKLQIISSFFGQKNDLPPSSAVDSRTSREAREFVISAIKQKSQDLY
IFVLANRLLEAINEQTRLIEMENFENGSVKYQVPEVECPSVPCYQLTQIAAGLMTCLTNL
LHSLQIMGDDLKRVQRELHQYKLSPERLLPFPEKISQAVGTDIPTDVAPEAACRKSLTDA
AVQTEPASFLQTNNCDAVKKNAGKSTENFHTDDQPTEFSGRSIIKDALPTGSCNTAASEK
KNDFFSFFYLLEPILRNGKMGTDDGLYLFDTDIAKLEEQPCSEIITIESNCTIGEIKKQI
QEEEESLCSSYLVLGGRPLEDDWTLAQCNIQEFSTLDLSYRLLGGAKKRKKKMYTTPKKI
KHKKKKVKLAVLKYYKIDENGKVSRLRKECTSESCGAGVFMANHYNRQYCGKCYCTMVVQ
DPVQREQKPGKGKGH
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaggaagtgatgcgcatgcggacgctgatcagcggataattgaaaaaatgact
aaaagaatccataatttagaagatcaactgaacgaggtggagaaattggatttcgagcag
gaaaacatttcactttctaacagtggttttcgatctcacagtgatgatttgtcgagttct
ttgacaatgaaatcatcgaaatgtcacagtgatgatgttgtggcttcatcttcgactgat
gatgagaggcttcttacaaaatctggcaatactgatgagatccgagatcatcagatgcca
gtttcagaggttccgcctgaatcacctctgcttgttcacacgctttcaatgagcaacgaa
tgtgattcagcagcggtggaattgaattcgtctagttttgacgagccattttcaaaatta
ccaatgctcaagacccatctgggccatttggcagtttttctccactatttgctctccaac
agcttgggaaacgttttcggagaatctatgctccaacgtttgcaagctggcgactctgca
cacgagaggaaaatatttgacgccttgattgcgccgcatttgatcgcattttttgaagaa
gctgcagattttgatcaattgccgaaaagaattcaagttatcgtggccactttggctaca
ttgtacaagcataataacgtcaagtgtcgcaacgcagctatggaaaaattgttggaacga
tgtccaacttatattgctaaagagaagcagcggtttgccaggccgcttttgcccaaagcg
agcaggcgtgctctccaaattaaagctcactgtttcaacattgctcctgtactgcagacc
acgttctgctatcagtgtcagaagctgatttggggaattggagcgatcagtctgttttgt
ggaaaatgcggagttgtgttgcacaagagttgtgttgaaaacctcgcggaatcttgcttc
ggttctatgaatcttaggcgacctttgattttgaaaaaaattgttggacggaaaaatgtt
gaatcttcaatggacaatatcgagcagtcaatcgaagaaggcaaagtttgtacggcaaga
acagatgccagtattctattgaaagagaattctggtgaaggtgacgggtcgtcagagaag
aacttaacacgcaattttgataaatcaggcgtcactaatgcagcagtgtcaaagcaatct
gcccacgttcacaatcttagtcgctcacagagcatgaacattgaggtagcatacaaaact
ttatcatatgaatgtgcatttaggaagaatcttacagaggtgccagacgtcgaagtagtg
ataccagtaggcgaagccataggttcgttattttattgtgatgctgataaaacggaaagc
ttaactaggatttctactaccgaaagcagcaccactgtgagtgttcaggatgtttcacgt
gagcgtagtccaatgatcagtgagcttgactctcctctgacttcatccgtctctttctcc
aacactcttcatgatattcatattgaactggacagtgattttaaagttgaaaacgaaatt
ccacttttggaagatttgcttgatttggaaagtttccaatatttagacaaacgagagaaa
aatcgtctcgaagtcatatatgagttatttcatactgaacaaactcacgttagaaacttg
aagatattatatcggttgttctacaaacagctattgaattttaacgtaatttcatttgaa
tttgcttcattacttttttcaaatttggaagatgtgcttaatttacacgtagaaatgaat
gaagccatgaagaacatgatgcaaaataacaaactcattggtgatattagcattatgatg
ctccagtttgatggtaaagagcgcatgagaaacatcgactcactgcattgccaaaaactt
cagtctgctattgaagctttgaagcatcgtgtagttaaagatcagaagctccgtgaattt
cttcaggtcgtggaaagttttccagtttgcaggaaattgcagttgaaagatatgttgccc
atggagatgcaacggttgaccaaatatccgcttttgcttgaaaatgtactcaaatacact
gaagaagttatgactgtgtatcatttattagatcccagtgaagaagcagatcgtttgcga
acatgcattgaatgttctcgatctatacttgaaagtgtgaacagtgcgaagcgaaatgcg
gaaaacgtgcttcgtttacagcgtctgcaacaaatgttagatacagctcagtttgataaa
gttaatcatccgattgtatctgaattttgtcctctggacgtgcggcgattctctttaatt
cacgaaggaccattaatttggcgattgaataaaagcaagattgttgatttgcatgttgtt
ttgttggatgaaattttgctgttgctaagtccaacatcagatggtcacttggcactgcgt
tttcataatatcaatatatcgtgtggaaaagatgaagtgaaatggacacactgtccatta
ttaaaactgaacagtttgattgcgaaagatgttgctacagctggtttaaatttatcgtgg
agcaaattgaagcgagcaaaaagcatgagcagaaaacaagcgtacgtcacggtcaaccag
gtcaagaatccaaaagcggcgatagcttttatgaaattccaaacagtgctagaaagaaag
aaattgaaacaagaagataaattggttataagattgttaaatgagaagcttcagataatt
tctagcttttttgggcaaaagaatgatcttccaccttcatcagctgtcgacagtcgaact
agcagggaagctagagagtttgtcatttctgctattaagcaaaaatctcaagatttgtac
atttttgttttagctaatcgattacttgaagcgatcaacgaacaaactcgtcttattgaa
atggaaaatttcgaaaacggctctgttaaatatcaagtgcccgaagtggaatgtccttca
gtgccttgttatcagctgactcaaattgctgcaggtctgatgacttgcttgaccaatctg
ttgcacagtttgcaaatcatgggcgatgatttgaaacgtgttcagcgtgagcttcatcag
tataaattgtctcctgaacgtttgcttccgtttccagaaaaaataagccaagctgttgga
actgatattcccacggatgttgcacctgaagctgcttgtaggaaaagtttaactgatgct
gcagttcaaacagagcctgcttcttttttgcaaacaaataattgcgatgctgtgaaaaaa
aatgcaggaaagagtacggaaaattttcacactgatgatcaaccaactgaattttctggc
cgctcaataataaaggatgctttgcctacaggaagttgcaacacagcagcatcagaaaaa
aaaaatgactttttttcttttttctatttattagagcctatacttagaaatggaaagatg
ggaactgatgatggtctttatttgttcgatacagatatagcaaaacttgaagagcagcct
tgttcagagattattactatcgagtcaaattgtacaattggtgagattaagaagcaaatt
caagaagaagaggaaagtttatgttcatcttatttggtactgggcggaagacctttagaa
gatgattggactttggcacagtgtaatattcaagaattttctacacttgacttatcctac
aggcttctcggaggtgcgaaaaaacgaaagaagaagatgtacacaacacccaagaaaatc
aaacacaagaagaagaaagtgaaacttgcagttttgaaatattataaaattgacgaaaat
ggaaaagtatcacgacttcgaaaagagtgtactagtgagagctgtggagccggcgtgttc
atggccaatcattataatcgtcagtactgtgggaaatgttattgcactatggtggttcag
gatcctgttcaaagggagcaaaagccaggcaaaggcaaggggcattga
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