Trichinella spiralis: Tsp_00360
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Entry
Tsp_00360 CDS
T01609
Name
(RefSeq) alpha-amylase
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00500
Starch and sucrose metabolism
tsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Tsp_00360
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Tsp_00360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-GeneID:
10901737
NCBI-ProteinID:
XP_003376257
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MNVKPACEFPLLIFSTAFFYSYAFNSECFKQLAVDPTRQLVVHLFEWGWTDIAKECKNYL
WKSGIGAVQVSPPNEHIFIVENNDLPWWSRYQPISYQLYSRSGSEKEFINMVEECNKYGI
RIIADIVINHMVGANMEGYGWHGSYFKSTPFEEYFPSVPYNETDFHDKICDRNIEDYGNR
WQVRNCRLVNLVDLDHSNPNVQASIVAYMNRLIDIGVAGFRIDAAKHMWPDMLRKIIYQL
KPLNSAYFPRNQCPFIFNEVIDQGGEPIKAEEYLDIGRVTNFKYGLDLSAAVKRRKNFKY
LINFGEAWNYFPSNGALVFVDNHDNQRGHGGGGSVLTFKDGNAYKMAVHFMLAWSYGLPR
LMSSYYFNTANQGPPSTGFPFFNTTSPMFDRNGKCIPSTGWTCEHRWPSFYQMSLFHQNT
SNKAIWNTVVDEHRIAFSKGNSGFFALNNHPTENWILHVNTGLHPGYYCDHITGNLNVKR
NSCSGKTVFVNPNGWIDLLVRAEETLAISSKNALSKFKPSYRRTLVFVKKKTQIGEYLFM
RGRRPSSDSTRLQNQWKNKYTIPIVHVADYDPSFTDYHQWKQHDNMLQWSLSSSKIALKE
KKPTVENLFKMGSPLIWTTDNKHSNAYNIHNRYGAHYWMLDVMMDCSKTENDWFEFHIVK
QDGEMEKIINIKQCENAYLLLLGKKIKHHLARCGYVNIVEYGMQNCTIDLEKI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgaaaccggcatgtgagtttcctctgcttatattttctacagcatttttctac
agttatgcattcaattcagaatgctttaagcaactagctgttgatccaactcgacaattg
gtggttcatctgttcgaatggggatggactgatattgcaaaagaatgtaaaaattatctt
tggaaaagtggaattggtgccgttcaagtgtcaccacccaacgaacacatttttattgta
gaaaacaatgatttaccatggtggagtcgatatcagccgatctcttatcaattatacagt
cgaagtggttctgaaaaagaatttataaacatggttgaagaatgtaataaatacggaatc
cgaattatagccgacatagtgatcaatcacatggtgggtgcaaatatggaaggttacggt
tggcatggttcttatttcaaatcaacaccatttgaagaatatttcccatctgtgccatac
aacgagaccgatttccatgacaaaatttgcgatagaaacattgaagattatggaaatcgc
tggcaagtgcgtaactgtcgtctggtgaacttggtcgatttggatcattccaatccaaac
gtccaagcttccattgttgcttacatgaatcgtctgattgacatcggcgtcgctggattc
cgcattgacgccgccaagcacatgtggccagatatgttgagaaaaattatctaccaactg
aaacctctgaattctgcatattttccaagaaatcagtgtccattcatttttaatgaagtg
atcgatcaaggcggtgaaccaatcaaagccgaagaatacttggatattggtcgtgtgacc
aatttcaaatacggtctcgacttgtcagcagctgtgaagaggaggaaaaatttcaaatat
ttgatcaactttggtgaagcttggaattattttcccagcaacggcgctttggtattcgta
gataatcatgataatcagcgtggacacggaggaggaggatcagtcttaacattcaaggat
ggaaatgcgtacaaaatggccgtgcacttcatgcttgcctggtcctatggattgccaaga
ttgatgtccagttattatttcaatactgcgaaccaaggtccaccatcaactggctttccc
ttttttaatacaacaagtccaatgtttgatcgcaatggaaaatgcatcccatcaaccggt
tggacgtgtgaacacagatggccttcattttatcaaatgagtctattccaccagaatacc
agcaacaaagcaatttggaatactgtagtcgatgagcatcgaattgctttttccaaagga
aacagtggattcttcgctttgaacaatcatccaaccgagaattggattctccacgtcaac
accggacttcacccaggttattactgtgatcacatcacaggaaatttaaatgttaaaaga
aacagctgttctggaaaaacagtttttgtaaatccaaatggttggatagacttgcttgta
agagctgaggaaacattagccatcagttcgaaaaatgctctgtccaaatttaaaccatct
tacagacgaacattggtatttgtcaaaaaaaagacccaaattggagaatatctattcatg
agaggtagaagaccatcgtccgattcaacacgcctgcagaatcagtggaaaaataaatat
accataccaatagtacatgttgcagactatgatccaagtttcacggactatcaccagtgg
aagcaacatgataatatgcttcagtggtcattgtcaagttcaaaaatagcattaaaagaa
aaaaaaccaacagttgaaaacttattcaaaatgggaagcccgttaatttggactactgat
aataagcatagcaacgcttacaacattcacaacagatacggagcacattattggatgttg
gacgtgatgatggattgctccaaaactgaaaatgattggtttgaatttcatatagtcaag
caggatggtgaaatggaaaaaattatcaatatcaagcagtgcgaaaatgcttatctttta
ttactgggaaaaaaaattaaacaccacctcgctcgctgcggttatgtaaatattgttgaa
tatggtatgcagaactgcacaattgatcttgagaaaatttaa
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