Trichinella spiralis: Tsp_00379
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Entry
Tsp_00379 CDS
T01609
Name
(RefSeq) putative RNA recognition motif protein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
tsp
Trichinella spiralis
Pathway
tsp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Tsp_00379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_00379
Spliceosome [BR:
tsp03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
Tsp_00379
Complex B
Tsp_00379
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
10901718
NCBI-ProteinID:
XP_003376239
UniProt:
E5S9J0
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MTQFLPPNLLALFAPRDPLPYLPPIAKLSFEKKRAPYSGVAKFIHEFENPNDTPPPVKVE
TREERIERKRRERAELQNYKIEQGIATWNPSANDKASTDPFKTLFVARLSYDTTETKLRR
EFEVYGPIKKIYMITDIITGKSRGYAFIEYEHEADMHAAYKHADGKKIDKRRVLVDVERG
RTVKNWLPRRLGGGLGNTRRDRPPAGSISHDDDDRMMYSSSGDRYRDRDYDGREYDRSRR
RSHSRDRERGDRGRRDRDDYRDGRGGGDYYRNRDREFRADYSRREGRRDRDRRR
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgactcagtttcttccaccgaacttacttgcattatttgctcctcgtgacccgctgccg
tatttaccaccaattgcaaagttgtcatttgaaaaaaagcgagctccgtacagtggtgta
gccaaatttatacacgaatttgaaaatccgaatgacactccaccaccagtgaaagttgaa
acaagagaagaacgaattgaaagaaaacgacgcgaacgtgctgaactgcagaattataaa
attgaacaaggcattgctacatggaatccaagcgctaacgacaaagctagcacagatcct
ttcaagacgttatttgttgctcgattgagttatgatacgactgaaacaaaattgcgcaga
gaattcgaagtgtatggccctatcaaaaagatttacatgatcacggacatcattactggt
aaaagccggggttatgcttttattgagtatgaacacgaggctgatatgcacgcagcatac
aagcacgctgatggtaagaaaatagacaaacgacgtgtgcttgttgatgtggaacgtggt
cgtacagtgaaaaattggcttcctaggcgcttaggcggtgggcttggtaatactcgccgc
gacaggccgccagctggaagtatatcacacgatgatgacgaccgaatgatgtacagcagt
agtggtgatcggtatcgggatcgcgactatgacggtcgagaatatgatagatctcgaaga
agatctcacagtcgtgacagagaaagaggagacaggggacgtcgcgacagggatgactat
cgtgacggtagaggaggtggtgattactaccgtaatcgtgatcgtgaatttcgcgctgat
tacagtcgaagagaaggaagacgtgatagagatcgtcgaagatga
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