Trichinella spiralis: Tsp_00408
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Entry
Tsp_00408 CDS
T01609
Name
(RefSeq) putative vesicle transport protein SEC20
KO
K08497
protein transport protein SEC20
Organism
tsp
Trichinella spiralis
Pathway
tsp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Tsp_00408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_00408
Membrane trafficking [BR:
tsp04131
]
SNARE
SNAP-25[N] (Qb)
Sec20
Tsp_00408
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec20
YscO
Paxt-1_C
FliJ
FTA4
HpaB
Motif
Other DBs
NCBI-GeneID:
10901689
NCBI-ProteinID:
XP_003376211
LinkDB
All DBs
Position
Unknown
AA seq
236 aa
AA seq
DB search
MTSDNSTKDCELSIARSELTHLDISVKQLIRYIRGFEGSNSDLERLCLHCRADIFAMEQL
LEDYKQVLMLNKISDSDAEEFRFVTTYRIELENNIQSLREAILVASQNADNYERELLFSR
YNDDACTEILRKRRINEKKRNVSEARQLQSSLTSLLDKMNDTVQQSELTLNKLTASSTAL
RDATYEMHGMSSLIHTSGKLLKKYKRRQFSDRFIIFLCFGIFLLSAAYIVKIRLWK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgacttctgataattcgacgaaagattgcgaattaagcattgctagaagcgaattaaca
catttggacatatccgtcaaacagttgattcgatatattcgaggtttcgaaggctccaat
tcggacttggaacgtctgtgccttcattgccgagctgacatatttgccatggaacaactt
cttgaagattataagcaagtgttgatgttgaacaaaatcagtgattctgacgcggaagaa
ttcagatttgtgacaacttatagaattgaactggaaaacaatattcaaagtttaagggaa
gcaatccttgttgcttcgcagaatgcagataattacgaacgagaactcctattttcgcga
tataatgatgatgcatgtactgaaattttaagaaagcgaaggattaatgagaagaagcga
aatgtgagtgaggcgagacagttgcaatctagtttaacatcactgttggacaaaatgaat
gatactgttcaacaaagcgaattaacgttgaacaaattaactgcgtcttcgactgcactc
cgcgatgctacatatgaaatgcacggaatgtcatcattgattcacacatctggaaagctt
ttgaaaaaatataaacgaagacaatttagtgatcgttttataattttcctatgcttcggt
atttttctgcttagtgcagcctacattgtgaaaattagactttggaaataa
DBGET
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