Trichinella spiralis: Tsp_00477a
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Entry
Tsp_00477a CDS
T01609
Name
(RefSeq) putative immunoglobulin domain protein
KO
K10779
transcriptional regulator ATRX
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_00477a
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00477a
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
Tsp_00477a
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
Tsp_00477a
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
HDA2-3
NikA-like
Motif
Other DBs
NCBI-GeneID:
10901753
NCBI-ProteinID:
XP_003376272
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
KVDDNDEESEEMKEKTKKSSVEMNYSNLSNFMHFLIGYFLQDICRRCRIVRMKRRQLQWT
AARKKRMQSPRKKNTLRRDIRGIMKMKDLKKSTVKAHRDEMARRKRIEMLQKKVLAFLHT
VMKDVDFNVNRVLIVTPINVVLNWRNEISLWLDDHGFDKNIWAMHEVRTTKDRYYVIERW
ENDGGILIIGYELLRYLLTCTRKGNRAMIEKAFSKPDYAMVNFVKPNLLGTRMEFLNRFV
NPIKNGQMSDSTLGDVALMKRRVHILHNLLCGFVHRVDYRAISEALPPKFEYVLFVRLSN
VQRKLYTDYLGTFYDESRNVKDKSVLQSALFVHYQVLQRVCSHPRELFIMEERAQKKVQL
KRLPVSNGANGNKVMENKLNEYESEQSLSSSLSTNSCELTDEEPANREQSVAKDLPKPIE
PPPVSKKNWYLPTLKEDDPLLVEMSGKMVVLFEIIQRCGDIGDKVLIFSQSLITLDLIEE
LLRLQERNVGESSSREFNYWVPGIDYIRMDGSTNASTRERLAKKFNDETNRRCRVFLLST
KAGSLGINLIGANRVVVFDANWNPSHDLQAMFRVYRLGQCKPVYIYRLIAKGTMEETIYQ
RQVVKQSLSCRVIDEQQIGRHFTFSDLEYLYHFDPDEDDKHRTETPVLPKDRLLADLLCD
ISQWIIRYIEHDSLLKNIVEEKLTEEELKSAWREYEDERKREKDAKEQLELQQQMNYNVP
PPLFSHSTPTLLARLTGNYELAQHVRLPRPHSMTSSSTSPDLMMGTDRLFPEMREKMPDL
TFTSRAKFGNPPVNSSEINTLVTPEIRSKLLRIANRTGKSMQNWLKQISLEYPQATTNRV
ALQNVVDDLYRQHGQPRL
NT seq
2579 nt
NT seq
+upstream
nt +downstream
nt
ggaaagtcgacgacaatgatgaagaaagtgaggaaatgaaggagaagacgaagaaaagta
gtgttgaaatgaattattcgaatctctctaattttatgcattttttaattggatattttt
tgcaggacatttgtcgccgttgtcgaatagtgagaatgaaaaggaggcagttacagtgga
cagcagcaaggaagaaacgaatgcaaagtcctagaaagaagaacactttacgcagggata
ttcgtggcatcatgaaaatgaaagatttgaaaaagtcgaccgtgaaagctcacagagacg
agatggctcgcaggaaaagaattgagatgttgcagaagaaggtgttggctttcttgcata
cggtgatgaaagacgtcgattttaacgttaatcgagttttgattgtcactccgattaatg
ttgttctgaattggcgaaacgaaatatcactttggttggatgatcacggttttgacaaaa
atatctgggcaatgcacgaagttagaacgaccaaagacagatattacgttattgaacgtt
gggaaaatgatggcggcattttgatcatcggctatgaattgcttcgctatttgttgacgt
gtactcgcaaagggaacagagcaatgattgaaaaagctttttcgaaacctgattatgcaa
tggtaaattttgtgaaaccgaatttgttgggaactcgaatggaatttcttaaccgctttg
tcaatcctatcaaaaatggtcaaatgtcggattcaactttgggcgatgtggctttgatga
aacgtcgagtgcacattttgcacaatttgctgtgcggttttgtgcatagagtcgattatc
gtgctatttctgaggcgcttcctccgaaatttgaatacgttctatttgtacgcttgagca
acgtccaacggaaactttacaccgattatttgggcacattttatgatgaatcgcgaaatg
tgaaagacaagagcgttttgcagtcggcgttgtttgtccattatcaagttttgcaacgtg
tttgttcgcatcctcgcgaattgttcatcatggaagagagggcccagaaaaaggttcagt
taaaacgattaccggtgtcaaatggtgcgaatggaaacaaggttatggagaacaagctaa
acgaatatgaatctgaacagtcgctgtcttcatcactgtcgacaaacagttgtgaattga
ccgacgaggagccggctaatagagaacaatctgttgctaaagatttgccgaagccaattg
agccaccaccggtttcaaaaaagaattggtatttgcccactttgaaagaagacgatcctt
tgctagtggaaatgtcgggaaaaatggtcgtcttgtttgaaattattcaacggtgtggtg
atattggtgacaaagtgttgatcttctcgcagagcttaatcacattagacttaatagaag
aattgttgcgattgcaagagcgaaacgtcggtgaatcatcgtcgagagaattcaactact
gggtgccgggtattgattatattcgtatggatggttccacgaacgcctcgactcgtgaac
gcttggccaagaaattcaacgacgagaccaacagacgttgccgtgtttttttgctgtcga
ccaaagctggttcgcttggaattaatttgattggtgctaatcgagtggtggtgttcgatg
cgaattggaacccgtcgcatgatttacaagccatgttccgtgtttatcgtcttggccagt
gcaagccagtctacatttatcgtctcattgccaagggtacaatggaagagaccatttacc
aaaggcaagtagtgaagcagtcgttgtcgtgccgggtaattgatgaacaacaaattggac
gtcacttcaccttttccgacctggaatacttgtaccattttgatcctgacgaagatgaca
agcaccgtactgaaactccagtactgccaaaggatcgattgttggcagatttgctttgtg
acatttcgcagtggattatccggtacattgaacacgattcgctgttgaaaaacatcgtag
aggaaaagttgaccgaagaggagctgaagtcggcttggcgcgaatacgaggacgagcgaa
aacgggaaaaagatgccaaagagcagcttgaactacagcagcagatgaattacaacgttc
ctcctccgttgttttcacactcgaccccaactctcttagccagattaacaggaaactatg
aattggcgcagcacgttcgtctgccgcgcccgcattctatgacttcttcctccacgtcgc
ccgatctgatgatgggtactgaccgattgtttcccgaaatgcgggaaaagatgccagatc
tgacattcacgtctcgtgctaaatttggaaatcctccagtgaacagttcagaaatcaaca
cgttggtcactccggaaattcgaagcaagctgcttcgcatcgctaatcgaacaggcaaat
caatgcagaactggttgaagcaaatttcccttgagtatccgcaggcgaccaccaacagag
tagcactgcagaatgtcgtcgacgatctgtaccgccaacatggccaacctcgactgtga
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