Trichinella spiralis: Tsp_00484
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Entry
Tsp_00484 CDS
T01609
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit D
KO
K03251
translation initiation factor 3 subunit D
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tsp03012
]
Tsp_00484
Translation factors [BR:
tsp03012
]
Eukaryotic type
Initiation factors
eIF-3
Tsp_00484
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
eIF-3_zeta
Snf7
NARG2_C
Motif
Other DBs
NCBI-GeneID:
10901763
NCBI-ProteinID:
XP_003376282
UniProt:
E5S9R1
LinkDB
All DBs
Position
Unknown
AA seq
1138 aa
AA seq
DB search
MFQRPTYPLVHKTIQSTDDCLTNERLALVPDHHLLSSVTCRYRHCSVNCCCALEAMQNSQ
TVDDETLQHMFSKFRSKESNPNGYSRKLQFWMDSIRNLVYSKGNPIFTLGQLKQEFQWKN
YIPACLDHVIFEMLQSGIIMTRTEYENSLYGWFYKNLQKILREGWNYIFPHNDEREIEYS
LGEQILCKVQKLSLDSTISGNVISWNELRREIADICPVKRALDLVLSYLQSVRLVSSYQT
DDAETLLKFCLSSENLYPEITDIDISIYKIQKVTAKLQTEVELFNEAVSKLEDFSVASIR
QKKYSEAKRFILKRRYHENILANKLDAIYNLQSLYLKLMSAKNNAMVTGALETSKTALRN
KLNADISFSEIQTTLDEIEHAVEVQMDIEDSLIREKVDFTDEEIENELLAILKGMKLSEK
EKAGIFRNFPKLEFPKTLRSALRVIHSGHQVHMDENDSPKNSAVDNKQDLVSEYTVGKTF
SILYITVIHVVNTNFIGSDYLYFITLSFVTSLKLKILSCIINTVLPQIEMVDAEVEIENA
KDVVQSVEDQVPIENVEADNRNDSTEDENSDSENKWKMSLQEAVKKIVINPNGWGPVSIP
ESFRCLPYQAFDKSERISKIADWTGQLSREERRYGQGRYAAANANAAASTNQYAYYHEEE
ETAFQLVDGARSTKSAPTRNYRLRQLQLARRQMQKDRERQSQTQISSKHAKNREKDRHNQ
WRVFQKAFRQRQRYDRRGQKQVKSRLPSVTIKPEWEMLEEFDLAQLQKMNLPSVGDGEDI
ENERYGTLEYYERSFDRITGRNEVQLRRFFKSYYTISTTDDPVIERLAKNPHYTVFATDV
IIATLMCCTRSVYPWDIVIHRIGNKLFFDKRSSSKIDFPTVSETAIEPPQDEGNSINSPH
FLALEAMFVNQNFKQQVLKSDDEKYAFEHPDVPFVDENDPNRENVASIGYRYRTWDLGND
VNVVIRCEHDGVMKSPENETQFLTIKAFNEWDYRFSGGIEWRSKIDTQRGAVLATELKNN
SCKLAKWTVQALLAGSHYLKFGYISRIHTRDTTQHVILSTQQFRPAEFANQINLNMDNAW
GILRCFIDKCLELPSGKYLLMKDPNKPVMLLYKVPPDSFENEEEDQTESNELDEQSQA
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgttccagagaccaacgtacccccttgttcacaaaaccatacagtctactgacgattgc
ttgacaaatgaacgtctggcacttgtacctgatcatcatttactgtcttctgtaacttgt
cgttacagacattgctctgtcaactgctgttgtgcacttgaagccatgcaaaattctcag
actgtcgacgatgaaacactgcaacacatgttctcgaaatttcgttctaaagaaagcaat
ccaaatggatattcgcggaagcttcagttctggatggacagcataaggaatctagtgtat
tctaaagggaatcctattttcacactgggacagcttaaacaagaattccagtggaagaac
tatattccagcttgtttagatcatgtcatttttgaaatgttacaaagtggtatcattatg
actcggacagaatatgaaaattcgctttacggatggttttacaagaatttacaaaaaatt
ttaagagaaggttggaattatatattcccccataatgatgaaagggaaattgaatacagt
cttggagaacaaatattgtgtaaagtgcagaagttgtctttggattcgacaatttctggg
aatgtaatttcttggaatgaacttcgtcgcgaaattgctgacatatgtccagttaaaaga
gcactcgatttggtcttgtcttatttacagtccgtgcgacttgtatccagttatcaaacc
gatgatgctgaaacacttttgaaattttgtttgtcttctgaaaacctttatcctgaaatt
acagatattgatatttctatttacaaaatccaaaaggtgaccgcaaaattacaaactgag
gtggaattattcaacgaagctgtttcgaaattggaggatttttctgttgcctctattcga
caaaaaaaatattctgaagcaaaaagatttattttaaaaaggcgttatcatgaaaatatt
ctggcgaataagttggatgcaatttataatttgcagtcgctttatttgaaattgatgtcg
gcaaaaaataacgcaatggttactggtgccttggagacgagtaaaacagctcttcgaaac
aaactgaatgcggatatcagtttcagtgagattcagactacgctcgacgaaatcgaacat
gctgtagaagttcagatggatattgaagattctctaatacgggagaaagttgattttacc
gacgaggaaattgaaaatgagctcttagccattctaaaaggaatgaaattgtctgaaaaa
gaaaaagcaggaatatttcgaaattttccaaaacttgaatttcctaaaactttaagatca
gcattgcgtgttatacattctggtcatcaagtccatatggatgaaaatgattcacctaaa
aatagtgctgtggataataagcaggacctcgtatcagaatatacagtaggaaaaaccttt
agcattttatatattactgtaattcatgttgtgaatactaactttattggttcggactac
ctgtattttataacactatcatttgtcacttcattaaagctgaaaatcttatcgtgcata
ataaataccgtactacctcaaattgaaatggttgacgctgaagttgaaatagaaaatgct
aaagatgtggttcaaagtgttgaagatcaagtcccgatagaaaatgtcgaagctgataac
agaaatgattcaacagaagatgaaaacagtgattctgaaaataaatggaaaatgtcattg
caagaagcagtaaagaaaattgtaataaatcctaatggatggggtcccgtcagtattccg
gaaagttttcgatgtctgccttatcaagcttttgataaaagtgaacgaatttcaaaaatt
gccgattggacagggcagctttctcgtgaagaacggcgatacggacaaggacgctatgca
gcagctaacgcaaatgcagctgcatctactaatcagtatgcttattaccacgaagaagag
gaaactgcctttcaacttgtggatggggcgcgtagtactaaatccgctccgacacgcaat
tatcgtctacgacaattgcagttagctagacgacaaatgcaaaaagaccgtgaacggcaa
agtcaaactcaaatatcctctaaacatgcgaaaaatagagaaaaggatcgtcacaatcaa
tggcgagtgtttcagaaagctttcagacaacgtcagcgttacgatagacgaggacaaaag
caagtcaaatctcgtctgccatcggttacgataaaacctgaatgggaaatgctagaagaa
ttcgatttagctcaactgcagaaaatgaatttgccttctgtcggcgatggggaagacatt
gaaaatgagcgttacggaaccttggaatattatgaaagaagttttgatcgcattaccggc
agaaatgaagtgcaacttcggcgtttcttcaaaagttattacactataagcacaacggac
gatccagttattgagcgacttgcgaaaaatccacattacacagtctttgcgacggatgtg
atcattgcgacattgatgtgctgcacacgtagtgtatatccttgggatattgttattcat
cgaattggcaacaaactattttttgacaaaagatcgtcatcaaaaattgattttcctaca
gtcagcgaaactgctattgaaccacctcaagatgaaggaaattctataaattctcctcat
tttcttgctctagaagcgatgttcgttaatcagaattttaagcaacaagttttgaaatcg
gacgatgaaaaatatgcttttgaacatccagatgtgccatttgtagatgaaaacgatccc
aacagagaaaatgtggctagcattggctacagatatcgtacgtgggatttgggaaatgat
gtaaatgtagtgatccgatgcgagcatgatggagtaatgaaaagtccagaaaatgaaacg
caatttttaacaataaaagcgtttaatgaatgggattatcgattttctggtggtattgaa
tggcgtagcaaaattgacactcaacgaggagcagtcttggcgacagaattgaagaacaac
agttgcaagctggcaaagtggactgttcaagcccttttagcagggtctcattatcttaaa
ttcggttacatttctcgaattcacacacgtgatactacacaacacgtcattttgagcaca
cagcagtttcgaccagcggaatttgctaatcagatcaatctaaatatggataatgcttgg
ggtattttgagatgtttcattgacaaatgcttagagttgccgtctggaaaatatcttcta
atgaaagatccgaataagccagtcatgttgctatataaagttccaccggattcttttgaa
aacgaggaagaagatcaaactgaaagcaatgaattggacgaacagtcacaggcatga
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integrated database retrieval system
