Trichinella spiralis: Tsp_00556
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Entry
Tsp_00556 CDS
T01609
Name
(RefSeq) putative sorting nexin-13
KO
K17925
sorting nexin-13
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Tsp_00556
Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
Tsp_00556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nexin_C
PXA
Fructosamin_kin
PX
RGS
APH
NrS1-pol-like_tail
Motif
Other DBs
NCBI-GeneID:
10901844
NCBI-ProteinID:
XP_003376361
LinkDB
All DBs
Position
Unknown
AA seq
1085 aa
AA seq
DB search
MYMKNHVSNLILKIHYWLSTNCKLILLRQFYYLYEYRFPMFLEDLRGIHAISEGEHVIDK
MKDMPSESNVKLQCSENLERLINEVLDLALRDFVQSWYSVLTNDDSFAKCLRVLVLRSLR
SLITQLRRVNWVPLLTHDVVDDFATHLRLFRKAKQRCIKNSYSTQEEKAEVLEKYFFEME
NELEKTLFTPFGRSFEFFVGPTERLFTICFSDVVASRILAPLMDLLSDPDFICQSVLNYL
SDVPLKYEDFITILENSEDPDELTVTNEVLQQEIETQRSKDTGGADDNAVKQCLNSLLFL
KKLVINRLSRLQTNDSQMDDNGEGWQECAAMYDLSLAFVLCNHVALRYFVDYLSHTDGKS
YIDLYLTIEGFKNSFSSTQADCLDTSFAGDVKQIDSTVLASAREVALEIYKQYLENNCEK
MVDIDENIKKRLLTAVKTKAQPSQYFDELQRRLYEILEKDPRFYLSFKRSYSYVKLLAEL
KLLPILDKDESEQSDDVAAEPECSSAQVLIDSTTGDECDDFEDTEMEILTNVTYETDITT
IGIGNDQSNMFAVYNIQVRKLNYKKECIAQWVVTRRYSDFYTFNGLIKRKFPYLGKISFP
AKRAFNNMQHDFLERRKRSLNSYLRTLLDPALLRRCVGLEKLLLEFLCQKEYPTEGGTFS
SKITSVVDPIRSGVKYVGNAVISMPDTLFDGVCRVGDGLGKVTRTVLGIPETQIENDACG
GRVADSLSYESMDSIPLRILMLLMEEIFGQRNQNQWIRRRMVTFLQQFIHATQGYSFSRK
IVEYVHWLTSETQLIYYIKLFRNAMWPNGQLAESYPPRSAGIQLRTRIAAKAKVLAMLPD
ELKLFIGNETSCNGICLVFEAFQYKNLNRRLCYVLTELLKLISVNYVLKFAMFNDEEYEK
TVIKLLKQELETQCLEPLDRWYTGCISRGRAFKTDNGTIFVKFNQESDGAFDQLKGEYAS
LRWLYAANCIQVPKPIKCIEVPSNGALLVAEYIPQMKSLSKYAFDFGVQMAKLHLHNAEL
MKVEEERAKWVTAKHDEFEIQVVERFGFHVDTACGSLIMENTWNDNWVTAVAETVRHGDG
KAQQP
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtacatgaaaaatcacgtctccaatctaattttaaaaatacactactggctgagtaca
aactgtaaattaattttacttcgtcagttctattatttatatgaatatcgttttcccatg
tttttggaagatttacgtgggatacacgcaataagtgaaggtgaacatgttattgataag
atgaaagatatgccctctgaaagtaacgtgaaacttcagtgctctgaaaatttagaacga
cttataaatgaagttttggatttagctcttcgggattttgttcagtcatggtattctgtt
ttaacgaatgatgattcatttgccaaatgcttgcgagtactggttctacgttcgttacga
tctcttatcactcaattaagaagggtaaattgggtaccgttgttgacacacgatgttgtc
gacgattttgccacccatttaaggctatttcgcaaagcgaagcaacgttgcattaaaaac
tcatattcaacccaagaagaaaaggcagaagtattagagaaatatttctttgaaatggaa
aatgagcttgaaaagaccttatttacgccgtttggcagaagttttgaattttttgttggt
ccaaccgaaagacttttcaccatatgcttttcggacgtagtagcctctaggattttggcc
cctttaatggatcttctttcagatccagatttcatttgccagtctgtgttaaattactta
tctgacgttccgttgaaatatgaagattttattacaattttggaaaacagtgaagatcca
gacgagcttacagttacaaatgaagtcttgcagcaagaaattgaaactcagcgttcgaaa
gatacaggaggcgctgatgataatgcagtgaagcaatgtttgaatagtttattattttta
aaaaaacttgtaattaatcgactttcacgactgcaaactaatgactcacaaatggatgac
aatggcgagggatggcaggaatgtgcagcaatgtatgatctttcattggcttttgtactt
tgcaatcacgtcgcgcttcgttattttgttgattacctgagtcatacagatggcaaatca
tacattgacttatatttaacaatagaaggtttcaagaacagtttctccagtacacaggct
gattgtttggacactagctttgccggcgatgtcaagcaaatagattcaacagttctcgct
tcagctcgtgaggttgcattagaaatttacaagcaatatttggaaaataattgtgaaaaa
atggttgatattgatgaaaatataaaaaagcgtttattaacggcagtaaaaacaaaagcg
cagccatctcagtactttgatgaattgcagagacgtctttatgaaattttggaaaaagat
ccacgcttctatttatcatttaaacgaagttattcctacgtgaaattgttggcagaatta
aaattgcttccaattttggacaaggatgagtctgaacaatcagatgatgttgcagcagag
ccagagtgcagttcagcgcaagtgttgatagattccacaactggagacgaatgtgatgat
tttgaagacacagaaatggaaatcctaactaacgtcacctatgaaactgacatcactaca
attggtattggaaatgaccagtcgaacatgtttgctgtatataacattcaagtgagaaaa
ctgaattacaagaaggaatgcattgctcagtgggttgtcactagacgttattcagatttt
tacacgtttaacggtctaataaaacgaaaatttccatatttgggaaaaataagttttcca
gcgaaaagagcgttcaacaacatgcagcatgattttttggaaaggcgaaaacgttcgttg
aactcttatttacggacgctgttggatcctgcgctgttacgaagatgcgttggcttggaa
aagttgcttcttgaatttctttgccaaaaggaataccccactgagggtggtactttctca
tcaaaaattacatccgttgtggatccaattcgatctggtgtgaaatacgttggaaatgct
gtcatatccatgcctgatacacttttcgacggtgtgtgtcgtgttggtgatggtcttggc
aaagtgactagaactgtattagggatacctgagactcaaatagaaaatgacgcttgtgga
ggacgcgtagcggatagtttaagctatgaatctatggacagcattcccttgcgtattttg
atgctcttgatggaagagatatttggtcagcgtaatcagaatcaatggataaggcgtcgc
atggtgacctttttgcagcaatttattcacgctacacagggatatagctttagtagaaaa
attgttgaatatgtccattggctaacaagcgaaactcagcttatttattacattaaattg
ttcagaaatgcaatgtggcctaatggtcagttagcagaaagttatccgcctcgatcagcg
ggcatacagttgagaactcgcatagctgctaaggcaaaagtattagctatgcttcctgat
gaactgaaattgttcattggaaatgagacttcttgcaacggtatttgcttagtattcgag
gcatttcaatacaaaaatctaaatcgacggctgtgctatgtactcactgaacttcttaaa
ttaataagtgtaaactatgttttgaagtttgcaatgttcaatgatgaagaatatgaaaaa
actgttataaaattgcttaagcaagagcttgaaactcaatgtcttgaacctttggaccgt
tggtatactggatgcattagcagaggcagagctttcaaaactgataatggcactatcttt
gtaaagtttaatcaagaatcagatggagcttttgatcagttgaagggtgaatatgcaagc
ttgagatggttgtacgctgcgaattgtattcaagtgcccaaaccaatcaagtgtattgaa
gtgcctagcaacggagctcttcttgtggcggaatacattccgcagatgaagtcgttgagt
aaatatgcattcgattttggagttcagatggcaaaacttcatctacacaacgctgagctg
atgaaagtcgaagaggaacgagcgaaatgggtgacagcgaaacatgatgaatttgaaatt
caagtagtggagcggtttggcttccacgttgatactgcatgcggttcgttgataatggag
aatacttggaatgacaactgggtgacagcggttgcagaaacagtacgacatggcgatgga
aaagcacaacaaccataa
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integrated database retrieval system