KEGG   Trichinella spiralis: Tsp_00556
Entry
Tsp_00556         CDS       T01609                                 
Name
(RefSeq) putative sorting nexin-13
  KO
K17925  sorting nexin-13
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tsp04990]
    Tsp_00556
Domain-containing proteins not elsewhere classified [BR:tsp04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   Tsp_00556
SSDB
Motif
Pfam: Nexin_C PXA Fructosamin_kin PX RGS APH NrS1-pol-like_tail
Other DBs
NCBI-GeneID: 10901844
NCBI-ProteinID: XP_003376361
LinkDB
Position
Unknown
AA seq 1085 aa
MYMKNHVSNLILKIHYWLSTNCKLILLRQFYYLYEYRFPMFLEDLRGIHAISEGEHVIDK
MKDMPSESNVKLQCSENLERLINEVLDLALRDFVQSWYSVLTNDDSFAKCLRVLVLRSLR
SLITQLRRVNWVPLLTHDVVDDFATHLRLFRKAKQRCIKNSYSTQEEKAEVLEKYFFEME
NELEKTLFTPFGRSFEFFVGPTERLFTICFSDVVASRILAPLMDLLSDPDFICQSVLNYL
SDVPLKYEDFITILENSEDPDELTVTNEVLQQEIETQRSKDTGGADDNAVKQCLNSLLFL
KKLVINRLSRLQTNDSQMDDNGEGWQECAAMYDLSLAFVLCNHVALRYFVDYLSHTDGKS
YIDLYLTIEGFKNSFSSTQADCLDTSFAGDVKQIDSTVLASAREVALEIYKQYLENNCEK
MVDIDENIKKRLLTAVKTKAQPSQYFDELQRRLYEILEKDPRFYLSFKRSYSYVKLLAEL
KLLPILDKDESEQSDDVAAEPECSSAQVLIDSTTGDECDDFEDTEMEILTNVTYETDITT
IGIGNDQSNMFAVYNIQVRKLNYKKECIAQWVVTRRYSDFYTFNGLIKRKFPYLGKISFP
AKRAFNNMQHDFLERRKRSLNSYLRTLLDPALLRRCVGLEKLLLEFLCQKEYPTEGGTFS
SKITSVVDPIRSGVKYVGNAVISMPDTLFDGVCRVGDGLGKVTRTVLGIPETQIENDACG
GRVADSLSYESMDSIPLRILMLLMEEIFGQRNQNQWIRRRMVTFLQQFIHATQGYSFSRK
IVEYVHWLTSETQLIYYIKLFRNAMWPNGQLAESYPPRSAGIQLRTRIAAKAKVLAMLPD
ELKLFIGNETSCNGICLVFEAFQYKNLNRRLCYVLTELLKLISVNYVLKFAMFNDEEYEK
TVIKLLKQELETQCLEPLDRWYTGCISRGRAFKTDNGTIFVKFNQESDGAFDQLKGEYAS
LRWLYAANCIQVPKPIKCIEVPSNGALLVAEYIPQMKSLSKYAFDFGVQMAKLHLHNAEL
MKVEEERAKWVTAKHDEFEIQVVERFGFHVDTACGSLIMENTWNDNWVTAVAETVRHGDG
KAQQP
NT seq 3258 nt   +upstreamnt  +downstreamnt
atgtacatgaaaaatcacgtctccaatctaattttaaaaatacactactggctgagtaca
aactgtaaattaattttacttcgtcagttctattatttatatgaatatcgttttcccatg
tttttggaagatttacgtgggatacacgcaataagtgaaggtgaacatgttattgataag
atgaaagatatgccctctgaaagtaacgtgaaacttcagtgctctgaaaatttagaacga
cttataaatgaagttttggatttagctcttcgggattttgttcagtcatggtattctgtt
ttaacgaatgatgattcatttgccaaatgcttgcgagtactggttctacgttcgttacga
tctcttatcactcaattaagaagggtaaattgggtaccgttgttgacacacgatgttgtc
gacgattttgccacccatttaaggctatttcgcaaagcgaagcaacgttgcattaaaaac
tcatattcaacccaagaagaaaaggcagaagtattagagaaatatttctttgaaatggaa
aatgagcttgaaaagaccttatttacgccgtttggcagaagttttgaattttttgttggt
ccaaccgaaagacttttcaccatatgcttttcggacgtagtagcctctaggattttggcc
cctttaatggatcttctttcagatccagatttcatttgccagtctgtgttaaattactta
tctgacgttccgttgaaatatgaagattttattacaattttggaaaacagtgaagatcca
gacgagcttacagttacaaatgaagtcttgcagcaagaaattgaaactcagcgttcgaaa
gatacaggaggcgctgatgataatgcagtgaagcaatgtttgaatagtttattattttta
aaaaaacttgtaattaatcgactttcacgactgcaaactaatgactcacaaatggatgac
aatggcgagggatggcaggaatgtgcagcaatgtatgatctttcattggcttttgtactt
tgcaatcacgtcgcgcttcgttattttgttgattacctgagtcatacagatggcaaatca
tacattgacttatatttaacaatagaaggtttcaagaacagtttctccagtacacaggct
gattgtttggacactagctttgccggcgatgtcaagcaaatagattcaacagttctcgct
tcagctcgtgaggttgcattagaaatttacaagcaatatttggaaaataattgtgaaaaa
atggttgatattgatgaaaatataaaaaagcgtttattaacggcagtaaaaacaaaagcg
cagccatctcagtactttgatgaattgcagagacgtctttatgaaattttggaaaaagat
ccacgcttctatttatcatttaaacgaagttattcctacgtgaaattgttggcagaatta
aaattgcttccaattttggacaaggatgagtctgaacaatcagatgatgttgcagcagag
ccagagtgcagttcagcgcaagtgttgatagattccacaactggagacgaatgtgatgat
tttgaagacacagaaatggaaatcctaactaacgtcacctatgaaactgacatcactaca
attggtattggaaatgaccagtcgaacatgtttgctgtatataacattcaagtgagaaaa
ctgaattacaagaaggaatgcattgctcagtgggttgtcactagacgttattcagatttt
tacacgtttaacggtctaataaaacgaaaatttccatatttgggaaaaataagttttcca
gcgaaaagagcgttcaacaacatgcagcatgattttttggaaaggcgaaaacgttcgttg
aactcttatttacggacgctgttggatcctgcgctgttacgaagatgcgttggcttggaa
aagttgcttcttgaatttctttgccaaaaggaataccccactgagggtggtactttctca
tcaaaaattacatccgttgtggatccaattcgatctggtgtgaaatacgttggaaatgct
gtcatatccatgcctgatacacttttcgacggtgtgtgtcgtgttggtgatggtcttggc
aaagtgactagaactgtattagggatacctgagactcaaatagaaaatgacgcttgtgga
ggacgcgtagcggatagtttaagctatgaatctatggacagcattcccttgcgtattttg
atgctcttgatggaagagatatttggtcagcgtaatcagaatcaatggataaggcgtcgc
atggtgacctttttgcagcaatttattcacgctacacagggatatagctttagtagaaaa
attgttgaatatgtccattggctaacaagcgaaactcagcttatttattacattaaattg
ttcagaaatgcaatgtggcctaatggtcagttagcagaaagttatccgcctcgatcagcg
ggcatacagttgagaactcgcatagctgctaaggcaaaagtattagctatgcttcctgat
gaactgaaattgttcattggaaatgagacttcttgcaacggtatttgcttagtattcgag
gcatttcaatacaaaaatctaaatcgacggctgtgctatgtactcactgaacttcttaaa
ttaataagtgtaaactatgttttgaagtttgcaatgttcaatgatgaagaatatgaaaaa
actgttataaaattgcttaagcaagagcttgaaactcaatgtcttgaacctttggaccgt
tggtatactggatgcattagcagaggcagagctttcaaaactgataatggcactatcttt
gtaaagtttaatcaagaatcagatggagcttttgatcagttgaagggtgaatatgcaagc
ttgagatggttgtacgctgcgaattgtattcaagtgcccaaaccaatcaagtgtattgaa
gtgcctagcaacggagctcttcttgtggcggaatacattccgcagatgaagtcgttgagt
aaatatgcattcgattttggagttcagatggcaaaacttcatctacacaacgctgagctg
atgaaagtcgaagaggaacgagcgaaatgggtgacagcgaaacatgatgaatttgaaatt
caagtagtggagcggtttggcttccacgttgatactgcatgcggttcgttgataatggag
aatacttggaatgacaactgggtgacagcggttgcagaaacagtacgacatggcgatgga
aaagcacaacaaccataa

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