Trichinella spiralis: Tsp_00559
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Entry
Tsp_00559 CDS
T01609
Name
(RefSeq) putative bromodomain protein
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
tsp
Trichinella spiralis
Pathway
tsp03083
Polycomb repressive complex
tsp03250
Viral life cycle - HIV-1
tsp04068
FoxO signaling pathway
tsp04310
Wnt signaling pathway
tsp04330
Notch signaling pathway
tsp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Tsp_00559
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tsp_00559
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
Tsp_00559
04330 Notch signaling pathway
Tsp_00559
04350 TGF-beta signaling pathway
Tsp_00559
04068 FoxO signaling pathway
Tsp_00559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_00559
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00559
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_00559
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
Tsp_00559
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
Tsp_00559
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
Tsp_00559
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
Tsp_00559
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_KAT11
KIX
RING_CBP-p300
zf-TAZ
Bromodomain
KIX_2
Med15_N
ZZ
Motif
Other DBs
NCBI-GeneID:
10901841
NCBI-ProteinID:
XP_003376358
LinkDB
All DBs
Position
Unknown
AA seq
1865 aa
AA seq
DB search
MADQLALGQPRVKKLKLGSPNLISNNTNNDFNIDWRSLDVELPDELLEPNAAGACHSDVG
GTLQQQGCATATNALNGSVAACNGPTAVVGPPPSTSDSSGDSFNMPSAVTGLSETVTTCS
SSYVSNGLPMSTVSGGGGNSLTVAGNASSLMNAAGVARSPNIRGGAPNNFQEQQAQGAFS
SSGAYMNSSAGAPMPPQYSTLNSQRMPMQAPRPPGSSMLNGHQLNAPGPNAQNGIRMNKN
SGFTNVVQSTPGNPPPMVGNIVPPSHMQQMASPNQMIANQQVNPNPVRMAPGPMGHVPSS
HYQDQHYISSQMIGNVNSARNHTPDYTFPQQQQQQHGVMPPYNAGINYVSQRNQFAGPVP
NSSSPLLASLGDAVTTVAASVQQQQLPMGLNSNAGGIMTSGNIMPTQGNSNGSNTAQDPE
KRKLIQQQLVLLLHAHKCQQRERDPSGQRSQCSLPHCQTMKNVLNHMTGCTEGRACQDGF
PDSPVVRGVVSPSYRYAAPMAASQTSPSFGPSFPPLENASVPKEWHKLVTSDLRQHLVTK
LVKAIFPSPDPAAIHDQRIKDLIQYARKVEKEMFDVAEDREEYYHLLAEKIYKIQKELQE
KKQKRLEMARAQTVASSQPSAPLTPWDSANPPNRVAPVDSLRSVSPSNSSHHFSNATSLG
SNATLSVKNESISVKGEDCTTYDSISVGSVKVEAGPHIKNEPADGQTASVTESVKMENVK
MENVKLEKGNLEIMKSNPEKVFTQDELVRALLPVWERIDRMEEAIPFRVPVDPQLLNIPD
YFDIVKKPMDLLTIKENLLGGEYKKPWDFCDHLSEVFVEEIDPVMRMLGYCCGRKLSFTP
LALVCYGQPMCAIPRDAHYYCYEPKFVVENGIRFVHCTMIRFIPAGLPHCKLSMHVENRV
NKFLRKSNSCAGEVIIRVLASSDKEVEVKPLMKTKFCTIGEIPEKFPYRTKAIFAYEVVD
GVEICFFGLHVQEYGSNCPQPNSRRVYIAYLDSVHFFQPKHIRTAVYHEILLGYLEYVKV
LGYTMAHIWACPPSEGDDYIFHCHPAEQRIPKPKRLQEWYKKMLDKGIVERIVVDYKDIY
KHAQDEHLQSATELPYFEGDYWPNVLEDCIKELDAEEAERRRELEAQAAADAAGDDVEDL
IDEVHIHEKKKSMKIQKKKSQKNKNSQSKKSKKIISGTGNELSDKIYTMMEKHKEVFFVV
RLHSAQAAAVLAPVNDPDALITCELMDGRDSFLSIARERHWEFSSLRRAKFSTMALCYEL
HTQGQDKFVYTCNGCKGTNAMWHCTICDVSFSLMCILLGVGIVEAEVILKFLSQDFDLCQ
ACYEKSNHEHKMEQIKSIISDDNSNSGESGASSANSRNESIQRCMQSLVHACQCRDANCR
RLSCHKMKRVVQHTKVCKKRQVGHCPVCKQLVALCCFHARTCSEPNCSVPFCQNIRQKLN
EQQLQLRKRAQREMQRRMNMMQHQSMPVATTGPPMYHHHHQSAAPSQPSPSVPAVGGQPP
SAPPAAVRAAMEVERIAASQSYARHPNVQMPRQMVAPGANAMATRHVMPASTMGAGSGGC
WGDPGVPPKMVGMRGPPPSQVHRHPATAQQDAAGSFQPGGDGMMNPSMQMAMPPRMPYAD
GRVQMLLQRLKTSNKAEFESLTRELNNDPQLLATVINMRHQQIGSAPQVTPNMVPSPRAQ
WNVSSQVAGNYGVSSPGMPPPSGQGQMQQRPQFYPSTGANSGGGGSAGPQRMPHPSPAQL
GPPSYVSQQQQHDQQRRMGPAPGQYQSGQQAAALGRGYVGSEQQPQAAYGSSQLPRYQIP
VQGEMFFNNINQYAKNAEIEAEILKSHIQIIVHGTTVVNRIGILILTVVWLCFVLCYTIR
LYWIV
NT seq
5598 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcagttggctttgggacagccaagggtgaaaaaactgaaattaggctctcca
aatctcatctctaacaatacgaacaatgatttcaacatcgattggcgatctttggatgtt
gaattaccggatgaattgttggagccgaatgcggccggcgcttgtcactctgacgtcggt
ggcacgcttcagcagcagggttgcgcaacggctacgaatgcattgaacggttcagtagct
gcatgtaatgggccgactgctgttgtcggcccgccgccttccacgtcggattcttccggc
gacagctttaacatgccttctgctgtaaccggattatcggaaacggttacgacttgttct
tcgtcatatgtttccaacgggttgccaatgtcgactgtcagtggaggtggtggtaacagt
cttactgttgctggaaatgctagtagtcttatgaacgctgcaggcgtggccagatcgccg
aatattcgtggtggcgcgccaaataatttccaagaacagcaagctcaaggcgcatttagt
agtagcggtgcatacatgaattcaagcgctggcgctccgatgcccccgcaatattcaaca
ttgaacagtcagcgcatgccaatgcaggctccacgtccaccaggaagttcaatgttaaat
ggtcatcagctgaatgcccctggaccgaatgcacaaaatggtattcgaatgaacaaaaat
agtggatttactaatgtagtccaatcgacacccggcaatccgccacctatggtcggcaac
atagttcctccatcacacatgcaacaaatggctagtccaaatcagatgattgcaaatcag
caggttaatcctaacccagtgagaatggcacctggaccaatgggacatgttcccagtagt
cattatcaagatcagcattacatatcatcacagatgattggaaatgtaaattctgcaaga
aatcatactcccgactacacatttcctcaacaacagcaacagcaacatggtgttatgcct
ccatacaatgcaggcatcaattatgtttcacaaagaaatcagtttgccggccctgtgccc
aatagtagttcgccgctgttggcatcactaggcgatgcagtgacaacggttgcggcgtct
gtacagcagcagcaacttccgatgggattgaattcaaacgctggaggtataatgacaagc
ggcaacattatgcctactcaaggaaattcaaatggaagcaatacggcgcaagatcctgaa
aaacgaaagctaattcaacaacagctggttttgcttttgcatgctcacaagtgtcaacag
cgtgaaagagatccatccgggcaacgttcacagtgtagtttgccccattgccaaacgatg
aaaaacgtattaaatcatatgacgggttgtacggaaggtcgtgcatgtcaagatggcttt
cctgattctccagtcgttagaggagtggttagtccttcgtatcggtacgctgctccaatg
gctgcatcgcaaacatcccctagcttcgggccgagctttccgccacttgaaaatgcatct
gttccgaaagaatggcacaaacttgttacatcagacttgcgtcaacatcttgttacgaaa
ttggtaaaagctatttttccatcaccagatccagctgcaattcacgatcagaggatcaaa
gatttgattcagtatgctagaaaagtggagaaagaaatgtttgatgtggcggaagatagg
gaagaatattatcaccttttagctgagaaaatatataagattcaaaaagaattgcaagaa
aaaaagcagaaacgtttggaaatggctagggcacagacagtagcgtcttcgcagccttct
gctccactgactccttgggattcagcaaatcctccaaatcgagttgctccagtggatagt
ttgcgctcagtttctccatctaactcatctcatcatttctcaaatgctacttctttgggt
tcaaatgcgactttgtcggtaaagaacgagtctatttctgtaaaaggcgaagattgtact
acgtacgattcaatttctgttggttcagtaaaagtggaagcaggacctcatattaaaaac
gaacctgcagatggtcaaactgcttcagtcacagagtcggtgaaaatggagaatgtgaaa
atggaaaacgtcaagctagaaaaaggaaatcttgaaattatgaaatccaatccggaaaaa
gtttttacacaagatgagcttgtcagagcattgttgcctgtttgggagagaattgatcgc
atggaagaagcgattccatttcgtgttccagttgatcctcagctgttaaacattccagat
tactttgacattgtcaaaaagccgatggatttgttgacgataaaagaaaatttgcttgga
ggcgaatacaaaaagccatgggacttttgtgatcatctatcagaagtttttgtggaggaa
attgatcctgttatgcgcatgttgggttactgctgcggtagaaaattatcttttacaccg
ttagcattagtttgttatggccagccgatgtgtgccatacctagggacgctcattattat
tgttatgagccgaaatttgtcgtagaaaatggcatcagatttgtgcattgcaccatgatc
agatttatcccggcgggcttgcctcattgcaaattgtccatgcacgtggaaaaccgggtg
aacaaatttttgcgtaagagcaactcatgcgcaggcgaggttattatacgggttttggct
agctcggataaagaagttgaagtgaagccgttgatgaaaacaaaattttgcacgattggt
gagattccggaaaagttcccttatcgcacgaaagcaattttcgcttatgaagtggtagat
ggagttgaaatttgtttctttggtttgcacgtgcaagaatacggcagcaattgtcctcaa
cccaattctaggagagtttacatcgcatatttggacagtgtgcatttctttcaaccgaag
cacattcgcacggcagtttatcatgaaattctgttgggttacttagaatatgtcaaagtt
cttggttatacaatggcgcacatttgggcatgtcctcctagtgaaggtgatgattacata
tttcattgtcatcctgctgagcagaggataccgaagcctaagagattgcaagaatggtac
aaaaagatgttggataaaggaattgtggaacggattgtcgttgattataaggatatttac
aaacacgcgcaagatgaacatttgcagtcggcgacggaattgccatattttgaaggcgac
tattggccgaatgttttggaagattgcataaaggagttggacgcagaagaggctgagcgt
cggagggaattggaagcacaagcggcagcagatgctgccggagatgatgttgaagatttg
attgacgaagtgcacattcacgagaagaaaaagtcaatgaagatacaaaaaaagaaaagt
cagaaaaataagaactcccagtcgaaaaagagcaaaaaaatcatatctggcactggtaat
gaattgtcggacaaaatttacacgatgatggaaaagcacaaagaggttttctttgttgtc
cgattgcattcagcgcaggcagctgcagtgcttgctccggtgaacgatccagacgcgttg
attacttgcgaattgatggacggtcgtgatagtttcttgtccattgctcgggagcgtcac
tgggaattcagcagtcttcgacgagcgaagttttcaacaatggccctttgctatgaattg
catacacaaggacaagacaaatttgtatacacctgcaacggttgtaaaggaacgaacgct
atgtggcattgtaccatttgtgacgtaagtttttctttgatgtgtatactgctcggtgtt
ggaattgttgaggcagaggttattttaaaatttttatcacaggattttgatttatgccaa
gcctgttatgagaagtcaaatcatgaacacaagatggaacagatcaagtcaattatcagc
gacgataattcaaattctggagagtctggagcgtcgagcgcgaactcaagaaatgaatct
attcagcgctgtatgcaaagcttggtgcatgcttgccaatgccgggatgcgaactgtcga
cggttgagctgtcacaagatgaagcgtgttgttcagcacacgaaagtgtgcaaaaaacgt
caagtcgggcattgtccagtttgtaaacagttggttgcgttgtgttgcttccatgcaaga
acttgttctgagcctaattgttcggtgccgttctgtcagaacatacggcagaagttgaat
gagcagcagttgcagttgcgcaagagagcgcagcgagagatgcaacgccgtatgaacatg
atgcagcatcagtcgatgccagttgcaactactggtccaccgatgtatcatcatcatcat
cagtcagcagcgcctagccagccctctccgtctgtaccggcggttggcggccagccgcct
tcagccccacctgctgctgtgcgggctgcgatggaagtggagcgaattgctgcttcgcaa
agctatgcacgacatccaaatgtacaaatgccacggcagatggttgcacctggtgcgaac
gcaatggcaactagacatgtgatgccggcatcgacgatgggagcaggaagcggaggatgt
tggggcgatcctggtgttccgccgaagatggttggcatgcgtggaccaccaccttctcag
gtacatcgacatcctgcaactgcgcagcaagatgctgctggttcctttcaacccggtggt
gatggaatgatgaatccatcgatgcagatggcaatgccgccacgtatgccttatgcagat
ggtagagttcaaatgttgttgcaacgtctgaaaacatcgaacaaagctgagtttgaatct
ctaacccgtgaattgaataacgatccgcaattgctggctactgtaatcaatatgcgacat
caacagataggaagtgctccgcaggtgactccgaacatggttccaagtcctagagcacag
tggaatgtgagctcacaagtcgctggcaattatggtgtttcttctcctggcatgccacca
ccttctggtcaaggccagatgcaacaaagacctcagttttatcccagcacgggagctaat
agcggtggaggaggatcggctggaccgcaacgaatgccacatccttctccggcgcagttg
ggtccaccatcatatgtcagtcagcagcaacaacacgaccagcagagacgtatgggtcct
gctccagggcaatatcaaagtgggcagcaagctgccgcccttggtagaggttatgttgga
agtgagcagcagcctcaagctgcttatggaagttcgcaacttccgcgttatcagattccg
gttcaaggcgaaatgttttttaataatataaatcaatatgcgaagaatgcggaaattgaa
gctgaaatattgaaaagtcatatacaaattatcgtacatgggacgactgttgtgaacaga
attgggattctgattttgactgtcgtatggttatgttttgttttgtgctatacgattaga
ttatattggattgtttaa
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integrated database retrieval system
