Trichinella spiralis: Tsp_00614
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Entry
Tsp_00614 CDS
T01609
Name
(RefSeq) putative HEAT repeat-containing domain protein
KO
K16578
CLIP-associating protein 1/2
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00614
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tsp04812
]
Tsp_00614
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
Tsp_00614
Cytoskeleton proteins [BR:
tsp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
Tsp_00614
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Cnd1
CLASP_N
CEP104-like_TOG
Ku_C
HEAT
XMAP215_CLASP_TOG
Ku_N
UTP20
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
10901914
NCBI-ProteinID:
XP_003376429
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MGNFSELLNKNSTDPKTRVELGQQLLDLIQREGVPNDANNLTLFMDVMVALLALEILSLS
LEVSGATVSHIVLENASTIMERLGDNREQVRQDAVGLLLKLMNTPGCTPQGVLDRIVEGF
SHKQWLVRIGVMIVLQQILRSGNFIYCIQLALTNYYSYGPSCLQLGKLVPSICRLLADPM
NQVRDVATETLVEMYVFLGDKLAMDIQRKQLVPNARAAALFSRFEDVKRNGLVGSSCSSN
GTVGSALESVADFTDATPTAHRQISSVSTLKKPLLTAVKQSEISNFTGKRATSAPPVKRL
QTTSRYAGNAGAVDEESFYAAFEDVPKVELKRLRSLLISGASQYDEFFVELRSLEVPMQI
AGKDLRSQVVREVCITVAKKKHFFFYISTFAEYARPKNCARYNWIVGVEIQRNSKAYWSF
SDHFRDQAEMLFQSLDPGKQRQLLGEVSQSSSSHSLYNDLRTSQESVKCSTASQYGASRA
GGTIPCLRSASEIDTGAVRRAVAMKQANAGKAFLGVASSSNMNSLPRPMKMLLSTSGNHP
KFGRFGAPNPSTATAATSTRLESTPRSPTSTSNKSVSQRRKLDDVSSESSPCFFGERSFR
GSESSENSSSMMDVLRSCSSTVWIERKEGLLCLQSFFRSGGRLTAGELKKACDLFARLFV
DPHHKMFTVFLDTVIEFLQAHGSDIQDWLFVLLCRLLSKQSNELLPSVQSKLLKTMEVVR
AVFPVEAQFQALTRYLVDPTQTPNVKMKLNVLNYLNALIYSMQSCHLTDTADMRMAISRI
VQWTGEPKSTEVRRTAQATLLALFSLNTTMFSQILSSFSKAYQDTVSRILHTHVRHFPDL
STLCIHDSAEQSSKVIERNSDVQDSLRRTSEEIMRYPFSSDCKTTGSNGSTVVDSKNGSA
GQGGRLELLSNGVNTDEERQEEIIGQILTELSNHNASTRQPQRFQDYAELTILKLLDAHK
DPERKVTRAAEDCATVLALHLAPLVCLRVLTPVILNDQGPALLAAIKMTTKVIEQMDTDE
LLRILKELVPGIIMPTWAGRKCIIFLVDCDSAMFTEDACTAFQESITAIRDIYCHNSVTG
ERDYLATVLYNTVALADEHACHDDNLTLANRADDLFSRLFMHISNFEKNHEINDQLLIFC
RYNNISTANLPPSVMLDGRTNGEVKLISNLFDPETGEKLHRFNLVKYQEYGRRRIAMTEK
ELEEMSSFTSPGLVLLGFQPLNRLKVYHHLRPAFFISPNENIESEEAAQSTKCRRFHGIY
LPYEDDLRDLQAVIASAPKIQVDNQLVDLWKKVIKRMQIQYTVGTIQNPVLQKHYRTLEA
VVLDREKIGHFVDQTSIHNKFTT
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atggggaacttttctgagctgctgaacaaaaacagcaccgatccaaagactcgtgtcgaa
cttggtcaacagttgctggaccttattcaacgcgaaggtgtacccaacgatgcgaacaat
ctgacgttgttcatggatgtgatggtagcattgctggctttggaaatactcagcctttcc
cttgaagtttccggggcaacggttagtcatattgttcttgaaaatgcttctaccataatg
gaacgacttggagacaatcgtgagcaagttcgtcaagacgctgttgggttgttgcttaag
ttgatgaacactccaggttgtacaccgcagggtgttttggaccgtatcgttgaaggtttt
tcgcacaaacaatggctagttcgtattggagtgatgattgtacttcagcagattttacga
tctggaaattttatttattgcattcaactagcgttaacaaattattatagttacggcccg
tcttgtttgcaattgggtaaattggtaccatcgatttgccgattgcttgcagatcctatg
aatcaagtcagagacgtggctacggaaactctggtcgaaatgtacgttttcttgggtgac
aagctcgccatggatattcaacgaaaacagcttgttccgaatgcgcgagcggctgctttg
ttttcccgtttcgaggatgtgaaacgtaacggactggtgggcagcagttgtagtagcaac
ggcaccgtgggcagtgcgctggagtctgtagcagatttcaccgatgcaacaccgactgct
catcgtcaaatatccagtgtatccacgttgaagaagccattgttgactgctgtgaagcaa
tcagaaatttcgaatttcacggggaagcgtgcaaccagcgccccgccggttaagcgttta
caaaccactagtcgatatgcaggtaacgcgggtgcggttgatgaggagagcttttatgct
gcttttgaagatgtgccgaaagtggagttgaaacgcctccggtcgcttttgataagcgga
gccagccagtatgatgaattctttgtcgaactccgatctctggaagtgccgatgcagatt
gctggcaaagatcttcgatcgcaagttgttcgagaagtttgcatcaccgttgcaaaaaaa
aaacattttttcttctatatctcaacttttgcagaatacgcacgccccaagaattgtgcc
cgttataactggatcgttggagtcgaaatccaaagaaattcgaaggcttattggtcattt
tcggatcattttcgcgaccaagcagagatgctgtttcaaagcttggatccgggaaagcag
cgtcaactgctcggcgaagtaagtcagtcgtcgtccagtcacagtttgtacaacgacttg
agaacgtctcaagaaagtgtgaaatgctctactgcatcacaatatggcgctagccgagca
ggaggaacaataccttgcttacggtcagccagcgagatcgacaccggtgcagtacgtcgt
gctgttgcgatgaagcaagccaacgctggcaaagcattcttgggcgtggccagttcgtcg
aacatgaactctctaccgcgtccgatgaaaatgctcttgagcacgtctggcaatcatccg
aagtttggtcgatttggcgcaccgaatccgtcaacagcaacagcagcaacctctacaaga
ctagaatccaccccgagaagtcccacatccacgtcgaacaagtctgtttctcagcgccgt
aaattggacgacgttagcagcgaatcttctccgtgcttttttggcgaacggtcgtttcgt
ggcagtgaaagcagcgaaaacagcagcagcatgatggatgtgctgcgcagttgttcttcg
acagtttggattgaacggaaagaaggtttgctttgtttgcaaagctttttccggtcgggc
gggcgtttgactgcgggcgagttgaaaaaagcctgcgatctttttgctcgactgttcgtc
gacccgcatcacaagatgttcaccgtatttttggatacggtgattgaatttttacaagcg
cacggatcggatattcaagattggctgtttgttttgctatgccgtctgttgtcgaaacag
agcaatgaattgcttccgtcggtgcagagcaagcttttgaaaacgatggaagtggttcgg
gcggtttttccagtcgaagctcaattccaagcgttgactcgttacctcgtcgatcccacg
caaactccgaacgtgaagatgaaattgaatgtgcttaattatttgaacgcgctcatttat
tccatgcaatcttgtcaccttaccgacactgctgacatgcgaatggccatttcgagaatt
gtccaatggaccggcgagccgaaatcgaccgaagtccgtcgaactgcgcaagcgactctg
ctggcattgttcagcttgaacacgacgatgtttagccaaattttgagcagtttttccaaa
gcatatcaggatactgtatctcgaattttgcatacccacgtcaggcattttcctgatttg
tcaactttgtgcatacatgattcagcggaacagtcgtcgaaagtaattgaaagaaattct
gatgttcaggatagtttacgaagaaccagtgaagaaattatgagatatccgttttcgtca
gattgtaaaacaacaggatccaacggttctaccgtagtggactcgaaaaacggttctgcc
ggtcaaggagggcgtttggagttgctcagcaatggcgtcaacactgacgaagaacgacaa
gaggagattattggccaaattttgacagaattgtccaatcacaacgcgagcacaagacaa
ccgcaacgatttcaagattatgcagagttgaccattttgaaattgctcgatgcgcacaaa
gacccggaacgtaaagtgaccagagcagccgaagactgcgcgacagtgttggcgttgcat
ttggcgccgttggtctgcttgcgcgtgttgacgccggtgattttgaacgaccaaggcccg
gctttgttggcggcgatcaaaatgaccaccaaggtgatcgaacagatggacactgacgaa
ttgttgcgcattctcaaagaattggttccgggtattattatgcccacatgggcaggaaga
aaatgtatcatctttctcgtcgactgcgacagtgcaatgttcacagaagatgcttgtaca
gcttttcaagaaagcatcacagcaattcgcgacatatactgtcacaacagtgtaactggt
gaacgggattatttggccacagttttatataatacggtagctttggcagatgaacatgca
tgtcatgatgataatttaacacttgctaatcgtgcggatgatctgttcagcaggttgttt
atgcatatttcaaatttcgaaaagaaccatgaaataaatgatcaacttttgatattttgt
agatataacaatatttcaacagccaatcttcctccgtcggtgatgttggatggacgaacc
aatggcgaggtgaaattaatttccaatctgttcgatcccgaaactggagaaaagttgcat
cgattcaatcttgtgaaatatcaagaatacggcaggaggcgaattgcgatgactgaaaaa
gaattggaagaaatgtcatcctttacatctcccggtttagttttgttaggttttcagccg
ttgaatcgattaaaagtttatcatcatttgcgacctgcttttttcatttctccaaatgaa
aatattgaatcagaagaagcagcgcaaagcaccaaatgtcgacgatttcatggcatttat
ttgccgtatgaagatgatttgagagatttgcaagcagtgattgcttctgctccgaaaatt
caagtcgacaaccaattggtcgatttgtggaaaaaagtgataaaacgtatgcagattcaa
tatactgttgggactattcaaaatccagttcttcaaaagcattatcgtactcttgaagcg
gttgtattggatcgtgagaaaattggacactttgtcgatcaaacaagtatacacaacaag
tttacaacttga
DBGET
integrated database retrieval system
