Trichinella spiralis: Tsp_00687
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Entry
Tsp_00687 CDS
T01609
Name
(RefSeq) histidyl-tRNA synthetase, cytoplasmic
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_00687
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_00687
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_00687
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
Tsp_00687
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Tsp_00687
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Tsp_00687
Prokaryotic type
Tsp_00687
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
WHEP-TRS
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2d
MBT
tRNA-synt_2b
Motif
Other DBs
NCBI-GeneID:
10903930
NCBI-ProteinID:
XP_003376492
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MLKSCFSTAHRIFPVMMQEQLLSLIRQQGDLVRKLKLEKKDSSIIDIEVSKLLDLKAKLE
DGNQKKFVLKAPKGTRDYGPTQMAIREEVIQKVVQCFKRHGAQTIDTPVFELKETLTGKY
GEEGNKLIYDLQDQGGELLALRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRG
RYREFMQCDFDIAGSYDPMIPEAECLKIVAEIMNAVDLNAFELKINHRKLLDGILTVCGV
PEDQFSTICSSIDKLDKQPWEEIRLEMINEKGLSPDVSDKLEKLICLRQNTCSAASGKDL
NATLLEELSSHSMLKSSDVAQAALNEIKLLLSYCEAFEIEDKVVLDPSLARGLDYYTGCI
YEAVLLGEDESSVGSVAGGGRYDKLVNMFMTKGKDVPCVGVSIGIERIFAIMEHKQKLSG
EKVKSIETDVFVASAQKNLIKYRMSICSELWRSSIKAEMSYKANPKLLQQLQYCEENGIP
LAVIIGEREIEKNIVKIRDVASRQEVNYISTYR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaatcctgtttttctacagctcatcgaatatttccagtgatgatgcaagagcaa
cttttatctttaattcgccaacagggtgatttggttagaaaactgaaactcgagaagaaa
gattcttcgattattgacattgaagtaagcaagttattagatttgaaagccaagcttgag
gatggcaaccaaaagaaattcgtgttgaaagcgccaaagggtaccagagattacggtccc
acccagatggctataagagaagaggtaattcaaaaagtagtccagtgtttcaaacgacat
ggagcgcagacgatagatactcctgtttttgagctgaaagaaactctcactggaaaatac
ggtgaagaagggaataagttgatttacgatcttcaagatcaaggtggtgaattattagcc
cttcgttatgatttaacggtgccatttgctagataccttgcgatgaacaaaattacaaat
ataaagcgatatcacattgctaaagtttatcgtcgtgacaatccagcgatgactcgtggg
cgttatcgagaatttatgcagtgtgattttgacattgctggctcttatgatccgatgatt
ccagaggctgaatgtttgaaaattgtagcagaaatcatgaatgcagtcgatttgaatgct
tttgaactcaaaataaatcaccgtaaattattggacggcattttgacagtttgtggtgtt
ccagaagatcagttttctactatatgttcttccattgataaacttgacaagcaaccatgg
gaagagattcgtttggagatgatcaatgaaaagggactctcgcctgatgttagcgataaa
ttggagaaattgatttgcttacgacaaaacacatgttcagctgcttcgggaaaagattta
aatgcgacactgttggaagaactttcttcccattcaatgttaaaatcgagcgatgtagct
caagcagcattaaatgaaatcaagctattgttgtcttattgtgaagcttttgaaatagaa
gacaaagttgtacttgatcctagtcttgctcgaggacttgactattacactggttgcata
tacgaagctgttttgttaggtgaagatgaaagttctgttggatctgtagcaggtggtggc
cgatatgataaacttgtgaacatgttcatgactaaaggcaaagatgtcccttgtgtaggt
gtaagcattgggattgagagaatttttgctattatggaacataagcagaagctttctggt
gaaaaagtgaaaagcatagagactgatgtttttgttgcttccgcgcaaaaaaatttgata
aaatacagaatgagcatttgctctgaattatggcgttctagcattaaggctgagatgtca
tataaagcaaatcctaagcttcttcaacagttgcaatattgtgaagaaaatggcataccg
ttggcagttataattggtgaaagggaaattgaaaaaaatattgtgaaaatacgagatgtt
gcttcgagacaagaagtaaattatatatctacatatagataa
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