Trichinella spiralis: Tsp_00701 Help Entry Tsp_00701         CDS       T01609                                  Name (RefSeq) zinc knuckle protein Organism tsp  Trichinella spiralis SSDB OrthologParalogGFIT Motif Pfam:  Peptidase_A17 DUF1759 Integrase_H2C2 RVT_1 Asp_protease_2 DUF1758 zf-CCHC zf-H2C2 gag-asp_proteas HAD RVP UMPH-1 Motif Other DBs NCBI-GeneID:  10903916 NCBI-ProteinID:  XP_003376478 LinkDB All DBs Position Unknown AA seq 1759 aa AA seqDB search MAEEDWSKYRKGFRERKVRALALMQSKGSDCSGRLDDQGIELRSGPGMVPAATSMHELAA RLPRCDLPKFSGDFTEFRAFWDQFDHRVHQRMDLSNAAKLTYLRGCLTGKAADVISSLSS SNADYEVALNRLREEFDRPAKVIRHQIKKLVQTPPKDVGLRSQYDHLRRTIDALTALGKD PRKGGLREGELSAAEITIAISRDRLPTPVRIKWDEKTKANETMAADLSEYLQFLGEQAQL LEESRSDRSEPAKLTKPAKRRSSPLRRRHDEATVLQTAVADRFAVCEESPRAAETSELGR PTRQSKTRTPQRAGRCFYCQKHGHLKRNCPDRMGHLATSGRSTSGERNSDLSGPKAGKGR KTTEPRKAQVNIATTKHGWSRFQMIKAVAHGAHGRKRLVNCLLDTGAERSLVRQDVADEL KLAGEVHPTSFRGVGGSRFSCQASRLVRLWLSPVSGEHAGDRYELEAMTAPVLCEDLWQT PVSPNDWPHLQSLNLTREVGELTPVHVIIGLDSYFRFLGRQVIRGGDGDPVAVETRFGWI ICGPAALSGDRECRVHCIRTDDRLNAALRKFWELEAIGILPPETESGQTEMERRFKESLS FDGNRYSVGLLWKPGMASLPNNYATAIRRYRSLEKRLSRDSGFDKDYTTVMQSYLDNGWA EEAPASKTPGKTWYLPHHAVYQQGTTGRKFRIVFDGSAVHRGTSLNDHLESGPNLHVDLM GILLRFRRFRVGLQADIEKMYLQVGLHPEDRDACRFLWRGAGGGRAPREYRLTRVCFGLT CSPFLAIQTIRTHAENSQHAGDKTARLITSNMYVDDLVLSCDSIEEAKKLVHESKSLFGK GGFNLTGFVSNCSSVVGYDGALPFGKDPKPAGRLLKTLGVLWDTESDQLSFRQPEVDAEE QDTKRTLLSLAATIFDPLGYLTPFTVRAKMLLQLLWQEGTSWDDPLPVPVEAVWRNWKGE LADLSQVSIDRACIKCSLMELVHMDLHGFADASGSAYGAVVYLRLVHGNGKVEVRFLAAK SRVAPIKKLSLPRLELMAALLCARLVAYVKRKADLPIRSCFCWSDSSVALCWIRSNAQRW KPFVSNRVRDIQEITSPDSWRYCPTQDNPADLASRGCPLSKLAAGSLWHSGPRWLQLDES AWPKLKISHGRTPENMELENRKTVLVMTTSVKFDLRSVMDVARYSSYGKLVRVTAWCLRF IFNARSPMELRQKARGLTVPEMREAEKTWIRQVQVSAYGPGSHRRKDLQQFNPYLDEDGI LRVGGRLAFSELPQETRNPMLLPHGDGVVKLLIQHVHEQQLHAGVDQTLAATRKRFWITR GRSAVKEVVRKCVVCRRVTAKPFEQQMAELPPERTEPVGPFVYVGVDFAGPIMARCDGKT LTLLKTYVCIFTCMVVRAIHLELVPDMTVDSFLRALRRFISRRGRPRLLQSDNFQTFHLA SRFLRPLCNSRNWKVVQDHLAKEGIEWKFITERAPWCGGYWERLVRSIKVALSKVLGRCH AKPDELRTVLCEIEARINDRPLTIVSDRPDDQLALTPAHFLIGRELSSLPDRDCDGKQVQ GDNRVLSRLHRRWRYQRSHFKSQMERAKKLWNQADAVCFDVDSTVCQKEAIDELAKFMGK EEEISKMSLIDLLKSRNTDVFLVTGGFSHIAYYAADQLGIPHQNVFSNKLIFDSNGTFSN LISLNFNILHSENTKYLGNYVDFDKQQLTSTSNGKSLICAYLKNKFQFKMLVMIGDGMTD LHACPPADLFIGFGGNQVK NT seq 5280 nt NT seq  +upstreamnt  +downstreamnt atggcggaagaagactggtcaaagtatcgaaagggattcagagagcgcaaagtccgagcg ctggctctgatgcagtcgaaggggagtgattgctccggacgactggatgaccagggaatt gagttgagatcaggacctggaatggtgccggctgcgacctctatgcatgaacttgcggca cgactgccgagatgcgatctgcccaagttcagcggagacttcacggagtttcgtgcgttt tgggatcagtttgatcatcgcgtacatcagcgaatggacctgtccaacgcagcgaaactg acctacctccgtggctgcttaaccggcaaagcagcggatgtaatcagcagcctatccagc agcaacgctgattatgaggtggcgttgaatcgcctacgcgaggaatttgatcgaccggcc aaggtgatccggcatcagatcaagaaactcgtgcaaacgccacctaaggacgtgggtctg cgctcacaatacgaccatctgagacggacaatcgacgctttgactgcactgggcaaggat ccaagaaagggtggtctacgagaaggtgagctgtccgcagctgaaatcacgattgcaatc agtcgtgatcgccttccgacaccggttcggatcaagtgggatgaaaaaacgaaggcgaat gaaacgatggccgctgacttgtcggaatatttgcaattcctgggagaacaagcccaactc ctggaagagtcgcggtcagatagatcggaacccgccaagctcacaaagcccgccaaacgt cgaagcagtcctctcaggcgaaggcacgacgaagcgacggttctccagactgccgttgca gaccggttcgccgtgtgcgaagaatcgccacgagcggcagagacctcagagttgggacga ccaacgcgtcaatcgaaaacgaggacgccacaacgggctggtcggtgtttctactgccag aagcatgggcatctcaaaaggaattgcccggatcggatgggtcaccttgccacatccggc aggtcgacatccggggagcgcaactctgacctctctggaccgaaggcaggcaaggggagg aaaaccactgaaccaaggaaggcccaggtgaacatcgccaccactaagcacggctggagt cgttttcagatgattaaggctgtcgctcacggtgcccacggaaggaagcgtttggtcaac tgcttgttggacaccggagctgagcgatctctggtgcgacaagacgtcgcggacgagctc aagttggctggcgaagttcacccaacttctttccgcggtgttggtggctcgagattcagc tgccaagcatccaggttggttcgcctttggctcagccctgtcagcggagaacacgctggg gacaggtacgaactggaagcgatgacagccccggtactctgcgaagatctttggcagaca ccagtgtctccaaatgattggcctcatctccagagtctgaacctgacgagggaggtcggg gagctgacgccagtccatgtcatcattggattggacagctatttccgcttccttggaagg caggtgatccgtggtggagatggtgatccggtagccgtggagacccggttcggatggata atctgcggtccggcggcattatcaggggatcgggaatgcagggtccactgcatcagaacg gacgatcgtctgaatgcagctctccggaagttttgggaattggaagcaatcggcatcctc cctccggagactgagtccggtcagaccgagatggagcggcgattcaaagaatccctatct tttgacggaaaccggtactcagtgggactgctgtggaaacctggcatggccagcctgccg aataactacgccacggcaattcggcgatatcgatccctggaaaaacggctgagcagagat tctggatttgataaagactacacgactgtcatgcagtcgtaccttgacaacggatgggct gaggaagcaccggcatcgaagacgccgggaaaaacgtggtacctgcctcaccacgctgtg taccagcaaggcaccacgggtcggaagtttcgaatagtgttcgacggttcggcggtgcac cgaggaacctcactgaacgatcatttggagtccggaccgaatcttcacgtcgatctgatg ggaatcctgctgcgttttcgtcgcttccgggtaggactacaggcagacatcgaaaagatg tatctgcaggtgggtcttcacccggaagaccgggacgcatgtaggttcctttggagaggc gctggaggaggaagggctccaagggagtatcggttgacgcgagtgtgtttcgggctgact tgctcgccgttcctcgctattcagaccatccggacgcatgccgagaatagtcagcatgcg ggtgacaagacggccagattgatcacatcgaacatgtatgtcgacgacctcgtcctcagc tgcgacagcatcgaagaggcgaagaagttggtgcatgagtcaaagagtttgttcgggaaa ggtggattcaatctgactgggttcgtcagcaattgctccagtgtcgtgggatacgacgga gccctgcctttcggaaaggatccaaagccggcaggtcgactcttgaagacgctaggcgtc ttgtgggatacagagtcggatcaactctcattccggcagccggaagtcgacgcggaggaa caggacaccaagaggactcttctgagcctggctgcaacaatcttcgatcctctcgggtat ttgacaccatttaccgttcgggcgaagatgttgctccagttgctgtggcaggaaggaacc tcgtgggatgacccgttaccggttccagtcgaggctgtgtggaggaactggaaaggtgag ctcgccgatctgtctcaggtcagcatcgatagggcttgcattaaatgctcgctcatggaa ttggtccatatggacctccatggtttcgccgacgcgtctggcagcgcgtacggggccgtg gtttacttgcgtttggtgcatgggaacggcaaggtggaagtccggtttctagctgcgaag tctagggtggcaccgataaagaagttgagtctgcccaggttggaattgatggcagctctg ctttgtgctcgcttggttgcttatgtgaaacggaaggcagacttaccgatcaggagctgc ttctgctggagcgacagttcggtggccctgtgctggatacgaagcaacgcgcagcggtgg aagccgttcgtctcgaaccgggtacgggacatacaggaaatcacttcccccgattcgtgg cggtattgcccaacgcaagacaacccggcggatttggcgagcagaggatgccctctttcc aagttggcagctggaagcctgtggcattcaggacccaggtggctccagctggatgagagt gcgtggccaaaattgaagatcagccacggaaggactccagaaaatatggagttggaaaac cgaaaaacggttttggtcatgaccacctcggtgaaatttgaccttcggtcggtcatggat gtggcgcggtacagcagctatggaaagctcgtacgggtcactgcgtggtgcttgcggttc atcttcaatgcaagatcgccaatggagctgcgacagaaggcccgtggcctgaccgtgcct gagatgcgggaggcggagaaaacttggatcaggcaagtccaagtgagcgcatatggacca gggagccaccgcaggaaggatctccagcagttcaatccctacttggacgaagatggaatc ctgcgcgtgggtggtcgtctggctttctctgagttgcctcaggaaaccaggaatcccatg ctactcccacacggtgacggagtagtgaagctgctgattcagcatgtccatgagcaacag ctgcacgctggagtagaccaaactctggccgcgactcgaaaaagattctggatcaccagg gggagaagcgcggttaaagaggtggtgaggaaatgcgtggtctgtcgacgggtgactgca aagccattcgaacaacaaatggctgaactgccaccggaaagaacggagccagtcgggccc ttcgtatacgtcggcgtggactttgccggtcccatcatggcgaggtgtgacggcaaaacg ttgacgttgctcaaaacgtacgtgtgtattttcacgtgcatggtggtgagggccatccat ctggaactggttccagacatgacggtggacagcttcttgagagcgctgcggcggtttatc tctcgaagaggtcgtccccggctgctgcaatcggataatttccaaacgttccatttggcc agcaggttcctaaggccgctatgcaacagccgcaactggaaggtggtccaagaccatctg gccaaggaaggaatagaatggaaatttatcacggagcgagctccgtggtgcggcggttat tgggagcgtttggtcaggtcgatcaaggtagcgctcagtaaagtccttggaaggtgtcac gctaagcccgacgaacttcgcacggtactgtgcgagattgaagcaaggatcaatgaccgt ccgctgacgattgtaagcgacaggccggatgatcagctggcgctgacgccagctcatttc ctgattggtcgggaactgtcgtcgctgcctgacagggactgcgacggcaagcaggtgcaa ggcgacaaccgagttttgtcccggttgcaccggagatggcgataccaaagaagccatttt aagtcacaaatggaaagagcaaaaaagttgtggaatcaagctgacgccgtctgctttgat gttgattctacagtttgtcagaaagaggcgatcgatgagctggcgaaatttatgggcaag gaggaggaaatttcaaaaatgtcgctaattgatttgttgaagtctcgcaatacggatgtt tttttggttacgggcggtttcagccatatcgcatattatgcagctgatcaactgggaatt cctcatcagaatgttttttccaacaaactgattttcgattcaaatggtactttttcaaat ttaatttcattaaatttcaatattcttcattctgagaatacaaaatatctaggcaattat gttgactttgacaaacagcaattaacatcaaccagcaatggaaaaagtttaatatgcgct tatttaaaaaataaattccagttcaaaatgttagtcatgatcggcgatgggatgaccgat cttcatgcttgcccaccggcagatctgttcatcggatttggaggcaatcaggtgaaataa

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