Trichinella spiralis: Tsp_00705
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Entry
Tsp_00705 CDS
T01609
Name
(RefSeq) transcription elongation factor SPT4
KO
K15171
transcription elongation factor SPT4
Organism
tsp
Trichinella spiralis
Pathway
tsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tsp_00705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_00705
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_00705
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
Tsp_00705
RNA polymerase I system
Tsp_00705
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
Tsp_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt4
zf-C4
HVO_0758
Motif
Other DBs
NCBI-GeneID:
10903912
NCBI-ProteinID:
XP_003376474
LinkDB
All DBs
Position
Unknown
AA seq
199 aa
AA seq
DB search
MTIMTSDNIPKDFRNLRACLVCSMIKSIDQFESQGCDNCEQFLSMKHDRDKVYDCTSANF
DGMIFLTDPDDSWVGRWQMISKKKIGIYAISVSGTLPNAVVSEIRAMGMHYKPYMRDTTS
KLHLMQLLLGVLYFIVQIITKAHTFGTNGKRLMINTGAPLQIMYKSRNKAPPLAYPTTTT
LTMRTKHYLVLNVPTIADS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgacaattatgacatcagataatattccaaaagattttcgaaaccttcgagcatgctta
gtatgttcaatgatcaagagcatcgatcagtttgaaagccagggctgcgataactgtgag
cagtttttgtctatgaagcatgatcgtgacaaagtctatgattgcaccagtgcaaatttt
gatgggatgatttttttgacggatccggacgacagttgggtcggaaggtggcaaatgata
agcaaaaagaaaattggcatttatgcaatatcggtttcgggtactttaccgaatgcagtt
gtgagtgaaattcgagcaatgggaatgcattataagccttatatgcgagatacaacatct
aagttgcacttgatgcagctacttttgggtgttttatatttcattgttcaaataataact
aaagcacatacatttggaacaaatgggaaaaggctcatgataaatacaggagcaccgtta
caaataatgtacaagtcacgtaataaagcgcccccgttggcatatccaacaacaacaacg
ctaacaatgaggacaaaacattacctcgtactgaacgttcctaccattgctgacagttaa
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integrated database retrieval system
