Trichinella spiralis: Tsp_00774
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Entry
Tsp_00774 CDS
T01609
Name
(RefSeq) DNA replication licensing factor MCM8
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_00774
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_00774
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Tsp_00774
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
Tsp_00774
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
Tsp_00774
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
AAA_5
WHD_MCM8
Mg_chelatase
EGF
Sigma54_activat
AAA
AAA_3
AAA_16
AAA_30
AAA_22
RuvB_N
hEGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
10904163
NCBI-ProteinID:
XP_003376562
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MKQPLSKECVMKLFSIVVLLVLIFKVDAISYTCPFETFPDGIKGGKTSSDKCISIVTHEY
VKKYYGAKGNSTETGALACQHLFKNGAQMVFRNESDLIYNRYVKMLEDEYFLVHAGMEQM
ETSHYYTKNLYSPKLGYTILFYCYDYKMRKFEPKDFFMLTRCYTYKHVAMKGYVYDGMRH
PWLDVCHIHSPDCNDADKGFFPKCRCLQFRKQPILKYEKLFACQIEGCTYYACMHDAYRN
CEEDRVRNCSIVPGKKECREYTYILHSHQEKPFGKPCRKRDYGNTCKCPCSNRPWSSWSQ
SSHTCGKGYRQKSKPRVLYENENVNCNQQPEKCCIKTESIQLSDCLEKFVHSGLSLEKGS
FICMQNGGVPIQTDEGYICKCEDPLKHGYMCEYEHDICQKYQGICQNGGTCKGKGRSYYC
ICPTVKGCAHENMCQNGGTCVENENGLSCNCRYPYTGEFCETRMLVCPPRLCKNGGTCTA
FQELQGFLCTCAERYTGKFCETLIMDGEPPENLMNMIGLGIVGALVLIAIVIYVVHRIKE
RERVMLFIYILNYLLINSGGETLETFGIYHFYLLLLHISSFVFTAFIIRLFDVCSLNGHL
SLPSTTNAVDEQQADEISTTLLYAVSVEKSETYCSQYPAWLLYFPWAKFEQNSELHVLVN
ACSRVLEQSDRFCYSLNDVLRSRRFMIDFSKFSSALTAEHRTLISSTWTDHQADSLICAI
GLAMHTAVVDRLRSRLCEKLADRAEQLLHGDAVQFVQMVPKINARLYNLEKLTNIRQLDF
TDCGRLVSVVGVVIKAASVEPKCTACGFQCQSCGFRFQALLVDGLFSTPTRCPSVSGECR
GRVFEPVVDTVETLTETVDCQLIRLQELLPPGGNSATGTASLIPKTIDCELTDDLVSTCS
PGSVITLTGILKICLVFCHQFIVLFIVIRYSGVVRVRKNEEARRRGQCQYFLYLHANSVI
QKEDLFGVAAASISFSSSEARLAAMSAVGELMGDRNLFSRLVASLCPTIYGHEAVKAGLV
LALFGGATPSQQHSTTRSNIHALLVGDPGLGKTHLLQACADLSSRGVYVCASTTTAAGLT
VTLGRGVDGDATVEAGALVLANDGCCCIDEFDKLHSHQQCLLEAMEQQELSVCKAGARCQ
FSARVSVVAACNPAKGHYEPRLSLTANVNVGPALLSRFDLIFLLVDKPDQQADRRLSEHV
LAIRRPHSARLTDRLAAPDPIGAVPAPLFRQYVAFARQTVPAPKLSRAACRLLLAFFRRQ
FDQTVHVRTPVGVRQMESLIRLTQARAKCQLRSEATEQDAADVLEIVGHCPLLFAGTDRQ
SGNAELENKAGSEQRLSFAGRFLQALKRKAAQTPGSKGPFTRAELKAIASEVNNNSTTPT
SQSFDQLIDKLNNAGLLLLEKPNCFKLQLDGID
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaccgttgtctaaggaatgcgtgatgaagctgtttagcattgttgtgctactt
gttttaattttcaaagttgatgcaattagttatacttgtccatttgaaacatttcctgac
ggaataaaaggaggcaaaacttcaagcgacaaatgcatcagcattgtaacacatgaatac
gttaaaaagtactatggtgcaaaaggaaattcaacagagactggtgcgttagcttgtcag
catttattcaaaaatggtgctcaaatggtattcagaaatgaatctgatttgatttacaat
cgctatgtaaaaatgcttgaggatgaatattttcttgttcacgctggcatggaacaaatg
gaaacatcccactattacactaaaaacctctattctcctaaacttggctatactatattg
ttttattgctatgattataaaatgcgcaaatttgaacctaaagattttttcatgcttacc
agatgctatacttacaaacacgtagccatgaaaggatatgtatacgatggcatgcgacat
ccttggttagatgtttgtcacattcattcacctgattgtaatgatgcggataaaggtttc
tttccgaaatgtagatgcttacaatttagaaaacagccaatattgaagtatgagaagttg
tttgcatgtcaaattgaagggtgcacctattatgcatgcatgcatgacgcatataggaac
tgtgaagaagatcgtgtaagaaactgctctattgttccaggaaaaaaagagtgtagagaa
tatacgtatattttacattctcatcaagagaaaccttttggaaagccttgccggaaaagg
gattatggaaacacctgcaaatgtccatgttctaatcgtccttggtcatcctggagtcaa
agtagtcacacgtgtggaaaaggatacaggcaaaaatcaaaacctcgagtactgtatgag
aatgaaaatgttaactgtaatcaacaaccagaaaaatgttgcattaaaacagaatcaatt
caacttagtgattgccttgaaaaatttgtccattctggactatcattggaaaaaggatct
ttcatatgcatgcaaaatggtggtgtacctatacaaacagacgaaggatatatttgcaaa
tgcgaagatcccttaaaacatggatatatgtgtgaatatgaacatgatatctgccaaaag
taccaaggaatttgtcaaaatggtggaacatgtaaaggaaaaggaagatcttactattgt
atctgccctactgtaaaaggctgcgcgcatgaaaatatgtgtcaaaatggaggtacttgt
gtagagaatgaaaatggattatcttgcaattgccgttacccttatacgggcgaattctgt
gaaacaagaatgcttgtttgtcctccacggctgtgtaaaaatggagggacttgtacagct
tttcaagaactgcaagggttcctatgtacttgcgcagaacgttatacaggaaaattttgt
gaaacattgataatggatggagaacctcctgaaaatttgatgaatatgattggtcttggc
attgtaggggcattggtgttgatcgcaattgtaatttatgttgtgcatagaattaaggaa
agagaacgagtaatgctttttatttatattttgaactatttactgattaatagcggaggg
gaaaccttggaaacttttggaatttaccacttctatctgctgcttttgcacatcagttca
tttgttttcactgcttttattatccgtctttttgatgtttgcagtttgaatggacatttg
tcgttgccttcgacgacgaacgctgttgacgaacaacaggcggatgaaatttccaccacg
ttgttgtacgcagtctcggtggagaaatcggaaacgtactgttcacagtatccagcttgg
ttgttatactttccgtgggccaagttcgagcagaattctgaactgcacgttttggtgaat
gcgtgcagcagagttctggaacagagtgaccgattttgttacagtttgaacgacgtgctt
cgtagtcgacgttttatgatcgacttcagtaagttctcctcggccctgacggcagagcac
cgaacgctgatcagcagcacttggactgatcaccaagcggacagtctgatctgcgccatc
ggcctggccatgcatacagcggttgtcgaccgcctgcgatctcggctttgtgaaaagctt
gccgatcgagcagaacaattgttgcacggtgacgcggttcaatttgtccaaatggtgccg
aaaatcaacgctcgattgtacaatttggaaaaattaacaaacatccgacaactggacttc
acagactgcggtcgcctggtttcagtggtgggtgtggtgatcaaagcggccagtgttgaa
ccgaaatgcactgcctgtggatttcaatgccagagctgtggcttccggttccaggcgctg
ctggtcgacggtctattctccacgccgactcgttgtccatctgtgtccggtgaatgtcgt
ggacgtgttttcgaaccagtggtcgatactgtcgaaactctcaccgaaactgtcgactgt
caactgatacgtctgcaggagctgctgccaccgggcggaaatagtgcaaccggtaccgct
agtctgattccaaagacaatcgactgcgagcttaccgacgatttagtttccacatgttct
cctggatctgttatcactttaaccggtatattaaaaatctgtctggttttctgtcatcag
tttattgtgctgttcattgtgatacgatattcaggtgtggtgagagtaagaaaaaacgaa
gaagcccggcgtcgtggtcagtgccagtattttttatacttgcacgcgaattcggtaata
cagaaggaagatctgttcggcgtcgccgcggcgtccatctcgttcagtagcagtgaagct
cgtctggcggctatgagcgccgttggggaactgatgggcgacagaaatttgttctcccgc
ctggtcgcttcactgtgtccaacgatatacggtcatgaagcggtcaaagcgggcctggtg
ttggcactgttcggcggagctacaccgagccagcagcattcgactaccaggtcgaacatt
cacgcccttctggtcggcgatcctggtttgggaaaaacccatctgctgcaagcttgtgcc
gatctgagcagtcgtggagtgtacgtgtgcgccagtacgacaactgccgcgggtttgaca
gtcacgttgggtaggggcgtggacggtgacgcgacggtcgaagcgggcgcgttggtgctg
gccaacgacggctgctgttgcattgacgaattcgacaagctccactcgcaccagcagtgc
ttgctcgaggcgatggaacagcaagagttgagcgtttgcaaagccggcgccaggtgccag
ttttcggcccgggtgtcggtggtggcggcctgcaacccggccaagggtcactacgaaccc
cggctcagtttgactgccaacgtgaacgtcggtccggcgttgctttcgcggttcgatttg
atcttcctgctcgtcgacaagcccgaccaacaagccgaccgtcgtctcagcgagcatgtg
ctggcgattcgacgtccccactcggcccgactgaccgatcgactggcggcgccggatccg
atcggggcggtgccggcgcccctgtttcgacagtacgtcgcgttcgccagacaaaccgta
ccggcaccgaagctttcccgtgccgcttgtcgattgctgttggccttcttccgtcgtcag
ttcgaccaaacggtccacgttcggaccccagtcggagtcaggcagatggaatcgttgata
cgcctgactcaggccagggcgaaatgccaactccgatccgaagccaccgaacaagacgcg
gccgacgtgttggaaattgtcggccactgtccactactattcgcgggcacagatcgccag
tctgggaacgctgaactggagaacaaggccggctcggaacagcgcctatcgttcgctgga
cgctttttgcaagcgttgaagcgcaaagctgcccagaccccgggttcgaaaggtccattc
actcgggccgaactgaaagctattgccagcgaggtgaacaacaattcaacaacaccgacc
agtcagtctttcgatcaactgatcgacaagctcaacaacgctggtctgctgttgctcgaa
aagccaaactgcttcaagctgcagctcgatgggatcgactga
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integrated database retrieval system
