Trichinella spiralis: Tsp_00822
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Entry
Tsp_00822 CDS
T01609
Name
(RefSeq) domain protein, SNF2 family
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00822
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Tsp_00822
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
HARP
DEAD_2
DEAD
Motif
Other DBs
NCBI-GeneID:
10904376
NCBI-ProteinID:
XP_003376612
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MSVSSKFIMQIISEKRIIVYLERQNRSRTFRPTDGDWPQFEVLRRVTTTPEAENSNEKWT
AHCDPQITKMIFHSGHKLVLCDNDHLFCPMVTDIVKAFESISLCSSVKMTFCISSIALCN
IVMALSEEQLRRIEANRNRALQLRKAKQNSASLPSSSGCTLKNISGEKTSVSVAQSSTLA
AKPKNPPLGGLGSKISNNLSVQSGKGRSNNREVTAKCVLISGGRFEIHSSYHPGMVELFR
SLPKEKVFYNAVQRSWAFHVDMYPVVAESISKCKPPVKFDGLPLIVQNVLKQKKDYYCTG
IEREICRIDSEIKNQLFPFQLEAVKKGRLLIADEMGLGKTVEALAVASYYRNEWPLLVVC
PSSMKYTWVEEIENRLPFVKSNQIVVLNTGRDSLPNPSDCSVLITSYDFMVNQSEALIGR
KFSVVILDESHNIKNFRTQRYKVATKLLKTAKRVILLSGTPALSKPSELFTQIDCIAPRM
FKNFVEFGQRYCNPKMIKLGSKTVYDYSGASNLEELQLILKETIMLRRTKDQVLSQLPPK
IRKVVVLNKQLINLGLESLQSAKEKMDQSFGKHEYLLSYFAETAQAKIQATIEYISELIE
SNQKFIIFAHHMIMLDAISEFLSSKILVQAEDRAHRVGQLNSVLIIYLVAKGTADDNIWT
MIKKKLEILKMGGLSDQSFQSVEGPNADSTLDTTNTNNSKLEMEVNCQMDNVKFDSTAVT
QKSVDFFSDLRDEDLQT
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtttcatcaaaattcatcatgcaaataatcagtgaaaagagaataatagtatac
ctggagaggcagaatcgaagtcggacttttcggccaactgatggtgattggccgcaattt
gaggtgcttcgcagggtaacaacaaccccggaagctgaaaacagcaatgaaaaatggacc
gctcactgcgacccgcaaatcaccaaaatgatctttcactcgggccacaaactggtgtta
tgtgataatgaccatctgttttgcccaatggtgacggatattgttaaagctttcgagtcg
atatcgctttgtagcagtgtgaaaatgactttttgtataagcagtatagcattgtgcaat
atagtaatggctttatctgaagaacaacttcgtcgcattgaggcgaatcgaaatcgtgct
ttacagttgcgtaaagcgaaacagaatagtgcttctttgccgtccagttcaggatgtact
ttgaaaaatatttccggtgagaaaacgtcagtcagcgttgctcaatcttcaacgttggct
gcaaagccaaagaatcccccccttggtggattaggaagtaaaatttccaacaatttgtcc
gttcaatctgggaaaggacgaagtaataatagagaagtaacagcgaagtgtgtattaatc
agcggtggaagatttgaaatccattcttcttatcacccaggaatggttgagctgtttcgt
tcacttcccaaagaaaaggttttctataatgctgtacaacgtagttgggcttttcacgtt
gatatgtatccagttgttgcggaaagtatttcaaaatgcaagccaccggtgaaatttgat
ggtctaccgttgattgtgcaaaatgttctaaaacaaaaaaaggactactactgtactggg
attgaaagagaaatttgtcgtattgattcagaaataaaaaatcaactttttccatttcaa
cttgaagcagtgaaaaaaggcagattacttattgctgatgaaatgggtcttggaaaaacg
gtcgaagcactagctgttgcttcgtattatagaaacgaatggccattgctcgttgtttgt
ccctcttctatgaaatatacatgggtggaagaaattgaaaaccgtcttccttttgtaaaa
tcgaatcaaatagtcgttttaaatactggtcgtgattcacttccaaatccaagtgattgt
tcagttttaatcaccagctacgactttatggtgaaccaaagtgaagcactgattggtcgt
aaattctccgttgttatactagatgagagtcacaatattaaaaatttcagaacgcagcgt
tataaagtagctacgaaattattgaagactgctaaaagggtaattctgttgagcggaacg
ccggctttgtcgaagcccagtgaattgttcacccaaatcgactgcatagctccgaggatg
tttaaaaatttcgtagaatttggtcaacgttattgcaatccgaaaatgataaaacttgga
tcaaaaactgtttatgattattctggtgcatcgaatttagaagagcttcaattaattttg
aaagaaacaataatgctgagacgcacaaaagatcaagttctatctcagcttcctccaaaa
attcgcaaagttgtcgtattgaataagcaactgataaacttaggtttggaatcactacag
tcggccaaggaaaaaatggatcaaagttttggcaagcatgaatatttgctcagctatttc
gccgaaactgctcaggcgaaaatccaagcaacaattgaatacatttcagagttgattgaa
tcgaatcagaaattcatcatttttgctcatcacatgatcatgctcgatgcaatttctgaa
tttttatcctcaaagattttagttcaggccgaagatcgagctcaccgggttggacagctc
aatagtgttcttattatctatctcgtcgctaaaggaaccgccgacgacaacatttggaca
atgatcaaaaagaaattggaaattttgaaaatgggtggtctgagtgatcagagttttcaa
tcggtggaaggtccaaacgcggattctacacttgacactacaaatacgaataattcaaaa
ttggaaatggaagtcaattgtcaaatggacaacgtgaaatttgattctacagctgttacg
cagaaatcagttgattttttttctgatctccgggatgaagatttacaaacgtaa
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