KEGG   Trichinella spiralis: Tsp_00825
Entry
Tsp_00825         CDS       T01609                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
  KO
K20403  TELO2-interacting protein 1
Organism
tsp  Trichinella spiralis
Pathway
tsp04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    Tsp_00825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_00825
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_00825
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Chromatin remodeling factors
   ASTRA complex
    Tsp_00825
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  Check point factors
   Triple T complex
    Tsp_00825
SSDB
Motif
Pfam: TPR_TTI1_C TTI1
Other DBs
NCBI-GeneID: 10904373
NCBI-ProteinID: XP_003376609
LinkDB
Position
Unknown
AA seq 862 aa
MLNIKQLMLANASNELNPSLILNNNRYLRMISQMEKHIVEENVASLLSLPFTVLKCNKIS
VADIHQLFSLIFEIIKKCEHIEEADLISEVINRVLDFLCPLQDDMILKQIEPMILLTIIK
GLCDLFSKSGKDVLSHIQEEKKGLLLFSHLTYAFMQLLSTDMEAECLLYVCRCLRLMLTP
CLIASVLPGVCISVTNFLFHCYSSSEFSMLAEYLALLFDVINMAGSVEEKQDKEWRTTTC
TKLKTLLYKVLKKLVNCPNKEVRIILGRKITLLLEKRHAITVEVEHRFLDVVATLLYDTD
KLVQLSVKDSYCSNCKIQNLVIENFTSTLVTMTKMSDLLPVQQKVLLRTFCGYLKMFGKS
GLTMFCLCRKQASSLMNALVNSIEVRMRVVDIFEDCDCFWSSSKSQMMLLLQPDNSVVLV
TPTDNEAVSFYLDAFNLLVLIEDLDLLVDCLNFKRCRQNFRPEELFVVNSILHALMGKRP
KVGSQLARSLLPSTLARLVENRSLGKLNVILLLETIKFCALLLKEEIKEHLMSSLYAVLR
LTLRDESRRSAMLTLNSIAVALNQANVDELLLSNIGNLSSALLIQFRFYSLYPELSLTLS
ALLDRFVDLKHVEPLAPVLQEMLLVLDHGDEHPIENLCHLISALTRFCKLCNSDSKANVP
IEGEAEDERKDKLPWHLVLVVEIMHRARAWIRSGSIQTRIGFLELIVYCVQALCQCRRTL
LPLLHRLWPALLCRLDDSDVVCQFAAFKTLVACVENSGTFYSMRMQKEAWPIFDKFFSKL
AERSRRAGTSYMQTVHFRFQLHLISAMPKLFKILQVSLEIMESCVSCITVYLDEKQPDLL
RESAQKSLNALAEMKDNFLNEE
NT seq 2589 nt   +upstreamnt  +downstreamnt
atgcttaatatcaaacaacttatgttagcgaatgcttcaaacgaattaaatcctagtttg
attttaaataacaatcgttatttgcgaatgatttcacaaatggaaaaacacatagttgaa
gagaatgtggcgagtttgctttccttgccattcaccgttttgaagtgtaataaaatttct
gtagctgacatccaccagttattttcactgatatttgaaattataaaaaaatgtgagcat
attgaagaagcagatttaatatctgaagtgataaaccgagtgttggattttctttgccct
ttacaagatgatatgatattaaaacaaattgaaccaatgattttgctcactattattaaa
ggcttgtgtgatttattctcaaaatcaggtaaagatgtactttcacatatacaggaagag
aaaaaaggattgctactctttagtcatttaacatacgcattcatgcaactgctttctact
gatatggaagccgaatgtttattgtacgtctgccgttgcctacgtttaatgcttactcct
tgtttgattgcatctgttttgccaggtgtttgtatttctgttacaaactttttatttcat
tgctattcgtccagtgaattttctatgctcgctgaatatttggcattgttattcgatgtt
ataaacatggctggaagtgtcgaagaaaagcaggacaaagaatggcgcaccacaacttgc
acaaagttgaaaacattgctatataaagtgttaaaaaagcttgtcaactgtccgaataag
gaagtaagaataattttgggtagaaaaattacacttctgcttgaaaaacggcatgccatt
actgttgaagttgaacatcgttttttggatgtcgttgctactctcttgtacgataccgac
aagctagttcagcttagtgtgaaagattcttattgttcaaactgtaaaattcaaaattta
gttattgaaaattttactagtactttagttacaatgacgaaaatgtctgatttattgcca
gttcaacaaaaagttttgcttcgaactttctgtggttatttgaaaatgtttggcaaaagt
ggtttaactatgttttgcttgtgcagaaaacaagcttcttctttaatgaatgcgttggta
aatagtatcgaagtaagaatgagggttgtggatatttttgaagattgcgattgcttttgg
tcttcgtctaaaagtcaaatgatgctgctgttacaacctgataattctgttgtattagtc
acaccaactgacaacgaagcagtgtcgttttatttggatgcgttcaatcttttagtattg
atcgaagatttggatcttcttgttgattgtctgaattttaagcgatgtcgtcaaaatttc
agacctgaagaattatttgttgtcaattcaattcttcatgctttaatgggaaaacgacca
aaagttggctctcagttggcaagaagtttgctaccgtcgacgttagcccggctggtcgaa
aatagaagcctcgggaaattgaacgtgatattactgttggagacgattaaattttgtgca
ctgctgctgaaagaggaaatcaaagagcatttgatgtcatctctgtatgccgttttgaga
ttaacactgcgtgacgaaagtcggcgttctgcaatgctaactttgaatagcattgccgtt
gctttgaatcaggcaaacgtagatgaacttcttttatcaaatattggcaatttatcatcg
gcacttttgattcaatttcgtttctacagtctctatccggaattgtcgttgacattgagc
gcgttgttggatcggtttgtggatttgaagcacgttgaaccgttggcacctgttttgcaa
gaaatgctgctggttctggatcatggcgacgaacatccaatagaaaatttatgccacctt
atttctgcgttgactcgtttttgcaaactttgtaattcggattcaaaagcaaacgttcca
attgaaggagaagcagaggacgagaggaaggacaaacttccatggcatcttgtacttgtg
gtggaaattatgcatcgagctcgtgcatggattcgatcaggctcaatacagacacgtatc
ggcttcctggagttgatcgtatattgtgtacaagcgttgtgtcagtgtcgtagaactcta
ctgccgttgttgcaccgactttggccagctctgctttgtcgtctggacgattcagatgtc
gtttgtcagttcgctgcttttaaaacattggttgcttgtgtggaaaattctggaacattt
tattcaatgcggatgcagaaggaagcatggccaatatttgataaatttttttccaaattg
gctgaacgaagtcgaagagccggtacatcttacatgcagactgttcattttcgattccaa
ctccacctgataagtgctatgccaaaattgttcaagatactgcaagtatcgttggaaata
atggaaagctgtgtcagttgtattactgtgtacttggacgaaaagcagccagatttgtta
agagaatcagcgcagaaatcactgaatgcgttggcagaaatgaaggataattttctaaat
gaagaatga

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