Trichinella spiralis: Tsp_00865
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Entry
Tsp_00865 CDS
T01609
Name
(RefSeq) putative H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
tsp
Trichinella spiralis
Pathway
tsp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Tsp_00865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_00865
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_00865
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
Tsp_00865
Prokaryotic type
Tsp_00865
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
Tsp_00865
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
UPF0113
Motif
Other DBs
NCBI-GeneID:
10904423
NCBI-ProteinID:
XP_003376659
UniProt:
E5SAT8
LinkDB
All DBs
Position
Unknown
AA seq
529 aa
AA seq
DB search
MNSIYTVFFNRNNLQILTVNANLNICTVRLDAALCVQKMSEENWIKPSEKPPKLKTSEWP
LLLKDYERLNSRSNHFTPIVAGSSPLNRNIKDYISAGFINLDKPANPSSHEVVSWIKRIL
RVPKTGHSGTLDPKVSGCLIVCIDRATRLVKSQQSAGKEYVCVFKLHGSVESKRKVVEVY
FMLFCFFLLLALERLTGALFQRPPLISAVKRQLRIRTVYENKLLEYDEERNMGVFIVKCE
AGTYVRTLCVHLGYILGVGGVMQELRRIRSGHTSEKDNMVTMHDVMDAQWLYDNCQDESY
LRYVISPLEKLLVGMKRIVVKDSAVSEQFTFIVCYRCFRTSDKVNAICYGAKILLPGILK
YESGIELNDDVVVMSTKGEAVCLGIALMTSSTIAGCDHGVVAKIKRVIMERDVYPRRWCL
GPVAMKKKQMIKAGLLDEFGKPNERTPSDWHKIYINPNVKETSESENAENEKDKRNDDEE
EDDGNQPAKKMKIETLQTVQSDSDDEAQVEIPEKKKKKKKKKEKALEDE
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaatttatactgtgtttttcaatagaaacaatctccaaattttaactgtaaat
gcaaacctgaatatttgtacagtacgacttgatgctgcactttgtgtacaaaaaatgtcg
gaagagaactggattaaaccttcagagaagcccccgaaattgaagacctcagaatggcca
cttttactcaaggattatgagcggttgaactcacgatcaaatcattttacaccaattgtt
gcaggcagctctcctctgaatcgaaatatcaaagactatatcagtgccggtttcatcaac
ttggacaagcctgcaaatccttcgagtcatgaagtagtttcttggataaaaagaattctt
cgtgttccaaaaactggacatagtggtactttggatccaaaagtttcgggatgtttgatt
gtttgcattgatcgtgcgacgagactggtcaaatctcagcaaagtgcaggcaaagaatac
gtttgcgtgtttaagctacacggatcagtggaaagcaaacgcaaagtggttgaagtatat
tttatgttgttttgtttttttcttttattggcattggaacgattaactggtgcactgttt
caaagaccgccattgatatctgccgtgaagagacagcttcgcattcgtactgtttatgaa
aacaagctgttggaatatgatgaagaaagaaatatgggcgtgttcattgtgaaatgtgaa
gcaggcacgtatgtgcgaactttgtgtgttcatcttggttatatactcggcgttggaggt
gtcatgcaagaattgcgtcgcattcgttctggccatacttcagagaaagacaacatggtt
actatgcacgatgtgatggatgcgcagtggttgtacgataattgtcaagatgagtcgtat
ttacgttatgtaatttctcctttggagaaattgcttgtcggtatgaaacgcatagtagtg
aaagatagtgccgtaagtgaacagtttacattcattgtatgctatcgctgctttcgcaca
tctgataaggtgaatgccatttgctacggggcaaaaattttactcccgggcatattgaaa
tatgaaagtggaattgaattaaacgacgacgtagtagtgatgtctacgaagggagaggcc
gtatgtttgggcattgcgttgatgacttcttcgacaatcgcaggatgtgatcacggagtg
gtggcaaaaattaagagagtaatcatggaaagggatgtatatccgagaagatggtgtcta
ggacctgtagcaatgaagaagaagcaaatgatcaaagcaggtttactggatgaatttggc
aagcccaatgaacgtactccatcagattggcataaaatttacatcaatccaaatgttaaa
gaaacatctgaatcagaaaatgcagaaaatgaaaaagacaagcgaaatgatgatgaagag
gaagatgatggtaatcagccagccaagaaaatgaagattgaaactttacaaacagtacaa
agtgatagcgatgatgaagcacaggttgagataccagaaaagaaaaagaagaagaaaaag
aaaaaggaaaaagcacttgaagatgaatga
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