Trichinella spiralis: Tsp_00871 Help Entry Tsp_00871         CDS       T01609                                  Name (RefSeq) protein POP2   KO K12581   CCR4-NOT transcription complex subunit 7/8 Organism tsp  Trichinella spiralis Pathway tsp03018   RNA degradation Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     Tsp_00871  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tsp03019]     Tsp_00871 Messenger RNA biogenesis [BR:tsp03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      Tsp_00871   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      Tsp_00871 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  CAF1 RNase_H_2 Motif Other DBs NCBI-GeneID:  10904417 NCBI-ProteinID:  XP_003376653 LinkDB All DBs Position Unknown AA seq 493 aa AA seqDB search MQSFVNLILLLLKCIFQRFTVDLLLFHFSVWELLFIEYRSRMAGSKPPLPKTVSLQTSID RRRISHLPSSILRRSDETRIRDVWSHNLLLEFRKIMRLLPDYPVVAMDTEFPGVVARPYG EFRSSVDYQYQLMRANVDLLKIIQIGLSFFNHQGETPSECSTWQFNFNFSLAEDMYAQDS IALLQKSGIDFKRLETDGINPIDFAELMYGSGLLLLDNVQWISFHSGYDFGYLVKMLTNR NLPNNETDFFIILRRFFPNIFDLKYLMKSTRHLKGGLQEIADQMKVRRVGPQHQAGSDSL LTGKVYFKMKQTLFEGNINEQTFSGYLFGLSVPGANLVDAVSTDGMPSSDESSSTGDFDS DISSDEDDEEQDEEELDEEEVVDEENSDDDDGVDKDATLHANDSQSLVNGSESISSVDIS EASFVNFQLKKRSITSAESSTFSPQISDVSLKAESLTEGNKEAAEKLVLTITSKSECAVT VSENTRKHSQEHS NT seq 1482 nt NT seq  +upstreamnt  +downstreamnt atgcagtcgttcgtcaacctaatattattgttacttaaatgtattttccaacgatttact gtagatttattgttatttcatttttctgtgtgggagctgttgtttattgaataccgtagt aggatggcaggctctaagccgcccctaccaaagactgtatcccttcagacttcaatcgac cgaaggagaatttctcatttaccaagttcaattcttcgcagaagtgatgaaacacgcata agagatgtttggtctcataatctactgttggaattccgcaaaattatgagacttcttcct gattatcctgttgttgcgatggatactgaatttcctggcgtcgttgcacgtccgtacggc gaattccgcagttcagtcgactatcagtatcagttaatgcgtgcaaatgtggacctttta aaaatcatacagattgggttgtcatttttcaatcaccagggagaaacacccagcgagtgc tccacttggcagtttaattttaattttagcctagcagaggacatgtatgcgcaggattcc attgcgcttttacaaaaatcgggtatagattttaaacgattggaaacggatggaatcaat ccaatcgattttgccgagctgatgtacggttctggcctgcttctcctcgacaatgttcaa tggatttcatttcacagtggttatgactttggctatttggtcaaaatgttgaccaaccga aacctgcccaacaacgagaccgatttcttcattattttgcgtcggtttttccccaacata tttgatctgaaatacttaatgaaatcaacccgacatctgaaaggaggcttgcaggagatt gcagaccaaatgaaagttcgacgtgtcggcccgcagcatcaggcaggaagtgatagtttg cttactgggaaagtttatttcaagatgaagcagactctgtttgaaggaaatatcaatgag caaacgttttctggttatttgtttgggttaagtgttccaggcgccaatctcgtggatgca gtatcgactgatggtatgccgagtagtgatgagtcttcatctactggagattttgattca gatatatcatcagacgaagatgatgaagagcaagacgaagaggagttagacgaggaagaa gtagtggatgaagaaaatagtgacgatgatgatggtgtagataaagatgctacccttcat gcaaatgattcccaatcattagtcaacggatctgagtccatttccagtgtagatatcagt gaagcatcatttgtgaattttcagttgaaaaagagatcaattactagcgcagaaagctcc acttttagtccacaaatatctgacgtatctttaaaagcggaatcattgacagaaggaaac aaagaagcagcagaaaaattagttttaaccatcacttcaaaatcagaatgtgcggttact gtttctgaaaatacgaggaagcattcacaagaacattcatga

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