Trichinella spiralis: Tsp_00888
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Entry
Tsp_00888 CDS
T01609
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_00888
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
Tsp_00888
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
10904400
NCBI-ProteinID:
XP_003376636
LinkDB
All DBs
Position
Unknown
AA seq
429 aa
AA seq
DB search
MPKRPAGRLLLLICSISVLLGLCCTFGICEEMLLPVNSLVNSSTECATNANGQNCSMCSP
PSLMHPKSTFPIDLTVQHCSVSGHTPSPPLNFSPTLSLKVEPPFDYINPRLNSSERTFYS
FSAPPPHDSDFNDKVIYEQNMNFDSTPVNANSAYDFHKLPLFSNGLFPQQHYFYPNVKQT
RLEQTPYRQGSNNCTSLNCGFNYAVAYPSSNPAYESYSCKPTATNPAISCVLNSTDNVET
GGLFVPRPTTTTTITTTTTNPYVKATLTQPMPTKSSISWMRGTTNEAAEIAKEHSKTRTR
EKYRMVYSSFQRLELEKDFCYNRFVTTERRRILSKLLGLTERQVKIWFQNRRAKEKKCNN
RNATMTQGNCSPVVVEPLAKGSLPNLLRPQQEKLPLLSGTTEHHQYTTTGSSCLLQSPDS
VHSMSNSGI
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagcggccggccggccggctgcttttgctgatctgctcgatctccgtccttctg
ggcctgtgttgtacatttggaatttgtgaagagatgcttttgccagtcaactctctggtc
aacagttcgacagaatgtgcgaccaatgctaatgggcaaaattgttccatgtgttcacct
ccatcgctgatgcacccaaagtcgacattcccgatcgacttgaccgtacagcattgctct
gttagcggtcatacaccgtcgccaccgttgaacttttcacccacgctcagtttgaaagtg
gaaccaccgttcgactacatcaaccctcggctgaactcttctgaacggacgttttacagt
ttctcagcgcccccacctcatgatagtgatttcaatgataaggttatctacgagcagaat
atgaactttgattcgacaccggtgaacgcaaattcagcgtacgactttcacaagctgcct
ttgttcagcaacgggttgtttccacaacaacactacttttatccaaatgtgaagcagaca
cgcctcgaacaaaccccataccgccaagggtcgaacaactgtacctcgttgaattgtggc
ttcaattatgcggtcgcatatccgagctccaacccagcctatgaatcttacagttgcaaa
ccgactgccacaaatccggcaatttcgtgcgtactgaattccacggacaatgtcgagacg
ggtggattgtttgttccaagaccaacaacaacaacaacaattactactactacaacgaat
ccgtacgtcaaagccactttaacgcaaccaatgccgaccaagtcgtccatatcttggatg
cgtggaacgacaaatgaagcggctgaaattgcaaaagagcacagcaaaactcggaccaga
gaaaaatatcgcatggtctattcgagttttcaaaggctcgaattggagaaagatttctgc
tacaatcgcttcgtcactactgaacgcagacgtattttatctaaactgcttggactcaca
gagaggcaggtgaagatatggttccaaaatcgacgtgccaaagagaaaaaatgcaataat
cgaaatgcaaccatgacgcagggaaattgttcaccagttgttgttgaaccactggcaaag
ggaagtttgccaaatctacttcgcccacagcaagaaaagctacctctgctttctggtact
actgaacaccatcaatatacgacgactggatcatcttgtctattacaatcaccggacagt
gtacattcgatgtccaacagtggaatataa
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