Trichinella spiralis: Tsp_00909
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Entry
Tsp_00909 CDS
T01609
Name
(RefSeq) transcription factor IIIBsubunit
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_00909
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
Tsp_00909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Znf_XAF1_N
Motif
Other DBs
NCBI-GeneID:
10904638
NCBI-ProteinID:
XP_003376712
UniProt:
E5SAY1
LinkDB
All DBs
Position
Unknown
AA seq
605 aa
AA seq
DB search
MSTCPECGGRELVEDSTVGNNVCGNCGHVISENTIVSEVEFYETAGGRSVLLGQFIHKDG
SSISLTGMKNMNSLSSTELTYIKVRKHMENVASQLQLSQAVTEAGFRFYKIAHGRSLTRG
RKSSHVIPSLLYISCRLNAVPQMLIDFSDVAEVNVFTLGRTFSFLAREMHLKLPPTDPCI
YVLRFAQKLRFGDKENQVIHLALRLIQRMKNDWMTYGRRPAGLCGAALIIAARYYGFNRT
IENVVRVVHIGAGVLRKRLDEFCLTPSASFTLDEFCKFEILEQCDPPSFTKNMEKEEMKK
LLEEKLKPFDEELRETEKKVQLALKQKVRSRYGASSWSSDDEQQTAVKDSVTNEVASVDY
PEESSTASRLSEWEAAEASSMSLPSWSDIIPSSSSEMTSMEDEGPVDSTLEPQQTDASEL
NTLDDLDDDELDGYLLTPEEAALKTKLWIRVNGEFMEEYEKRKLLKEQEKEEGSKGRRNF
RKRGEEGTAATPGEAIKRMVFEKRLSKKINYEVLMEEDNFEDVSSPVQSAPETALCAFAS
DQLEEKLQKVEEATTPVSDIVEKVKQAEEAEEAVDSSDSENVQKRPSRIKLKPKFATVDV
KRRIG
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagtacttgtccagaatgtggtggcagagagttggtggaagacagcacagtgggaaac
aatgtttgtggaaattgtggtcacgtaattagcgaaaatacaattgtttccgaggtggaa
ttttatgaaactgctggtggtcggtcggttttattgggccagtttattcataaggatggt
agttcgataagcttgactggaatgaaaaatatgaatagtctgtcatcaactgaactgacg
tacatcaaagtgcgaaaacatatggaaaacgtggctagccagttgcagttatcccaagca
gttactgaagcaggattcagattttacaaaattgcgcatgggagaagtttgactcgaggg
cgaaaatcgtctcacgtcattccatctttgttatatatttcatgccgtcttaatgccgtg
ccgcagatgttgatcgatttcagtgacgtggctgaagtgaatgtcttcactcttggtcgc
acttttagcttccttgctcgtgaaatgcatttgaagttgccaccaacggatccttgcatt
tacgtgctccgctttgcgcagaaactacggttcggggacaaagaaaatcaggtgatacat
ctcgctttgcgtttgattcagagaatgaagaacgactggatgacgtatggacgacggcca
gctggtctgtgcggagcagcacttattatagctgcacgttattatggatttaatcggaca
atcgaaaatgtggttcgtgttgttcacatcggtgcaggggtgttgcgcaagcgtctggat
gaattttgtcttaccccttctgcatcatttacgttggacgagttttgcaaatttgaaatt
cttgaacagtgcgatccaccgtcatttacgaaaaacatggaaaaagaagaaatgaaaaaa
ttgttggaagaaaagctgaagccgtttgacgaggaacttcgggaaacggagaaaaaggtg
caattagcgttgaagcagaaagtgcgtagtcgttacggtgcgtcgagttggtcgtcagac
gacgaacagcagactgccgtcaaagacagtgtgacgaatgaagttgcttcggtcgattat
cccgaagaatcttctaccgccagtcggttgtcagaatgggaagcggctgaagcgtcgtcg
atgtcgctgccatcgtggtcggatataataccatcatcatcttctgaaatgaccagcatg
gaagatgagggaccggtcgattcgacgttggagccacagcaaaccgatgccagcgaactg
aacacgcttgatgatttggatgacgacgagctggacggatatttgctgactccggaagaa
gcggcgttgaagaccaaactgtggatcagagtgaacggtgaatttatggaagagtacgaa
aagcgaaagttgttgaaagagcaagaaaaagaagagggaagtaagggtcgaagaaatttc
agaaaaagaggcgaagaaggcacagcggccacacccggtgaagctataaagcggatggtg
tttgagaaacgtttgtcgaaaaagatcaactacgaagtgttgatggaagaggataatttt
gaagatgtttcttctcctgttcaatctgcacccgaaacagccctttgcgctttcgcgagt
gatcaacttgaagagaaattgcagaaagttgaagaagcgacaactccagtatcagatata
gttgaaaaagtgaaacaagccgaagaagctgaagaagcagtggattcgtcggattctgaa
aatgttcaaaagagaccttcgcggataaagctgaaaccgaaattcgctacggtcgatgtc
aagcgcagaattggttga
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