Trichinella spiralis: Tsp_00990
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Entry
Tsp_00990 CDS
T01609
Name
(RefSeq) DNA topoisomerase 2-alpha
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_00990
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_00990
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Tsp_00990
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Topoisomerases
Tsp_00990
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
Tsp_00990
Centrosome formation proteins
Centriole proteins
Tsp_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
ComGE
Motif
Other DBs
NCBI-GeneID:
10904668
NCBI-ProteinID:
XP_003376741
LinkDB
All DBs
Position
Unknown
AA seq
1357 aa
AA seq
DB search
MKNSEESPNTSNSKGTSKKKNVDVPHSDPLGVFESLDEIKASGKKRPTIESIYQKKSQLE
HILIRPDTYIGSIEPHTENMWVFDEEQQKMVIRELTYVPGLYKIYDEIVVNAADNKQRDP
SMNCIKISINATKNEIMVWNNGKGIPVVEHKEEKMYVPEMIFGTLLTSSNYDDTERKVTG
GRNGYGAKLCNIFSKRFVVETSCREYKKHFKQVWTKNMTATEKPVISDCVDQDFTCVRFI
PDLDKFGMEKLDDDIVALMCRRAYDIAGSTKGVKVFLNGKRIPVLGFKEYVDLYLKDRTT
DTGEPLKVVYEQPHPRWEVAVAVSDRGFQQVSFTNSIATTKGGRHVDYVCDGIVEKVIEN
VKKQTKKTGMNVRPFQVKNHLWLFINCLIENPTFDSQTKENMTLQPKSFGSKCTLSDKFF
SQVLKCGVLESVLSWLQYKAQAQLDKKCHSTKHSKLKGVPKLEDANEAGTKNSHRCTLIL
TEGDSAKSLAVAGFSVVGRDFYGVFPLKGKVLNVREANYKQIMENAEINNLIKIIGLQYK
CKYDTSEQMNSLRYGRVMIMADQDQDGSHIKGLVINFFHHNWPNLLRRNFIEEFITPIVK
ATKGREELQFFSIPQYFQWRAETANWKAWKVKYYKGLGTSTAKEAKEYFTNMDRHRIVFK
YEGPTDDDAIELAFSKKRVEDRKNWLGDWMLHKKQIQEANLPEEYLYQEDTKEISYKSFI
DKELILFSNMDNERSIPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEHSAYHH
GEVSLMSTIINLAHNFVGSNNINILLPIGQFGTRLLGGRDAASARYIFTMLSPVTRAMFC
TDDEPNLNFLFEDNQKIEPFWYCPILPLVLVNGCEGIGTGWSTKVPNHDPRIVVKNLKRL
MNDEELLPMYPWYKNFQGEISTLNASRFVCFGEIASVDDTTLEITELPIGTWTQNYKESV
LEPMLYGADGKQPVIQDFKEYHTDTTVRFIIRMSKEKMAEANAHGIHKYFKLQTIINSSS
MVLFDEHGCLKKFETAKDILISFYKVRLDMYVKRKAYLEGHLEAQANRLKAQARFIMEKI
EGVIKIENMKKKHIVEQLVERGYPADPVKKWKEAENMRKLKAMEEFVDETDEANEVEETG
ANEEDVCLSDYDYLLSMALIRLSEEEKDKLLKDRDVKIDELNSLKAKTPKMLWIEDLDKF
LDVLDKHELSEKEEAASAVKGIVTSGKGNKASSRNARKKVSTITAMPESEGIRIPPQITS
DLREKAEKADQVKQRMINLREAAKAGDEEAIKKLAKRKRITGPRTVAGAKVVAKKTSETS
KKLKKKAVKEKASPGLKRKKRRVVIDDSDDTDDYSSD
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattctgaagagtcaccaaatacaagtaattcgaaaggaacctcaaaaaagaaa
aatgtggatgtgccacattctgatccacttggagtttttgaatctcttgatgaaattaaa
gcaagtggaaagaaacgtcctactattgaatcgatttatcaaaaaaagtctcagttagaa
catattcttattcgtccagatacttacataggttctattgaacctcacactgaaaacatg
tgggtttttgatgaagaacagcaaaagatggttatacgtgaactaacatacgttccggga
ttgtacaaaatttatgatgaaattgttgtcaatgcagctgacaacaaacagcgggacccg
agcatgaactgcattaaaatatcgataaatgcaactaaaaatgaaatcatggtatggaac
aacggcaaaggaataccagtggtagagcacaaggaggaaaagatgtatgtcccagaaatg
atttttggcacactgttgacatcttctaattatgatgacacggaaagaaaagtcactggt
ggtcgcaatggttatggtgctaaattgtgcaacatatttagcaaacgatttgtagttgag
acaagttgtcgagagtacaagaaacattttaagcaggtgtggacaaaaaatatgacagca
acagagaagcctgtcatttctgattgcgtagatcaagattttacgtgcgtccgttttatc
ccagatttagataaatttggcatggaaaagttagatgatgatattgttgcgttgatgtgt
cgccgagcgtatgacatcgctggatctactaaaggagtgaaagtgtttttaaatggcaaa
cgtattccggtccttggatttaaagaatacgtcgatttgtacttgaaagatcgtactact
gatactggagaaccattgaaagttgtttacgaacaaccacatccccgttgggaagtagcg
gtggctgtttctgaccgtgggtttcagcaggtcagctttaccaacagcatagctacaaca
aagggaggtcgtcatgttgattatgtttgtgacggtattgtggagaaagtgattgaaaat
gtgaaaaaacagacaaaaaagactggaatgaacgtcagaccatttcaagtgaagaaccac
ttgtggctgtttataaattgtttgatcgaaaatccgacttttgattctcagacaaaagag
aacatgacacttcagccaaaaagcttcggttccaagtgcacattgagcgataaattcttt
tcccaagtgctgaaatgtggagttttggaaagtgtgctgtcttggttgcagtacaaggct
caggcgcagttggacaagaaatgccattctactaagcattcgaagttgaagggtgtgccg
aagcttgaggacgccaacgaggcaggtacaaagaattctcaccgatgcacgctgatactt
accgaaggagattcggccaaatcgttggccgtggccggctttagcgtcgtaggacgggat
ttctacggtgtatttccgttgaaaggcaaagtgttgaatgtgcgagaagcgaattacaag
cagattatggaaaacgccgaaattaataatttgatcaaaatcatcggtctgcaatataag
tgcaaatatgacacgtcagagcagatgaatagtcttcgttacggcagggtgatgatcatg
gctgatcaagatcaggatggatctcatataaaaggattggtgatcaatttttttcaccac
aattggccaaacttgcttcgtcgcaattttatcgaagaattcatcacgccaattgtcaaa
gcgaccaaaggcagagaggagttgcagttttttagcattcctcaatattttcaatggagg
gcagaaacggccaattggaaagcttggaaagtaaaatactacaaaggtttgggtacttcg
acggcgaaagaagcgaaggagtatttcaccaatatggatcgccatcgtatagttttcaaa
tacgagggtccgacggatgatgatgcgattgagttggcgtttagcaagaaaagagtggaa
gatcgtaaaaattggttgggcgattggatgttgcataagaaacaaattcaagaggctaat
ttaccagaagaatatttgtaccaagaggatacgaaagaaatttcttataaatcgttcatc
gacaaagagttgattttgttcagcaacatggataacgagcgtagcattccttcgatggtt
gatggcttgaagcctggacaacgaaaagttttgttcacttgtttcaagcgcaacgataaa
cgagaagtgaaagtcgctcagctagctggttccgttgctgaacattcagcttatcaccac
ggcgaagtcagtctgatgagcaccattataaatttggctcataatttcgtgggcagcaat
aacatcaacatattgctaccgattggtcaattcggcactcgacttctcggcggcagagat
gcggccagtgcaagatacatttttaccatgcttagtcccgtcacaagagcgatgttttgc
acggatgacgaaccgaatttaaatttcctatttgaagataaccaaaaaatcgagcctttt
tggtattgtccaattttgcccctcgtattggtcaacggctgtgaaggaatcggcactggc
tggtcaactaaagttcctaatcacgatccgagaattgtagtgaaaaacttgaagcgtttg
atgaacgacgaagagttgcttccaatgtatccgtggtacaaaaatttccaaggtgaaatt
tctactttgaatgccagtcgttttgtatgctttggtgaaattgcttctgtcgacgacacg
acattggaaattactgaactgccaattggaacgtggacgcaaaattacaaggaatcagta
ctggaaccaatgctttacggagctgatgggaagcagccggttattcaagatttcaaagag
taccatacggacaccactgtgcgtttcatcattcgcatgagcaaagagaaaatggctgaa
gcgaacgctcatggaattcacaaatatttcaagctgcaaactatcataaattcttcatca
atggtgctgtttgatgaacacggctgcttgaaaaaatttgaaaccgctaaagacattttg
atatcattttacaaggttcgtttggacatgtacgtcaagcgaaaagcttatttggaaggt
catttggaagcgcaagcaaatcgactcaaagctcaggcgcgctttatcatggaaaaaatt
gaaggcgtgatcaagatcgaaaacatgaaaaagaaacacatcgtagagcagctagtcgaa
cggggttatccggctgatccagtgaaaaaatggaaagaggctgaaaatatgagaaagttg
aaagcaatggaagaatttgtcgatgaaacggacgaagctaacgaagtagaagaaacagga
gcaaatgaagaagatgtttgtttgtctgattatgattatttgttgtcgatggctttgatt
cgtctgtccgaagaggagaaggacaaactgttgaaagatcgtgacgtgaaaattgacgaa
ttgaacagtttaaaggcgaaaacgccgaaaatgctttggatagaagatttggacaagttt
ttggatgttctagacaagcatgaactgtcggaaaaagaagaagcagcttctgccgtgaag
ggaatagttaccagcggcaaagggaacaaagcttcttctagaaatgcgaggaagaaagtc
agcacgattactgcgatgccagaaagcgagggaattcgaattccgccacagattaccagt
gatttgcgtgaaaaagctgaaaaggctgatcaagtgaaacagcgcatgatcaatcttaga
gaggcggcaaaagcgggcgatgaggaagcgatcaagaagttggccaagcgcaagcggatc
actggtccacgcactgttgccggtgccaaagtcgtcgccaaaaagacaagtgaaacatcg
aagaaattgaaaaagaaagcggtgaaagaaaaagcttctcctggtttgaaaaggaaaaag
aggcgagttgtaatcgatgacagcgacgacactgacgattattcatctgattaa
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