Trichinella spiralis: Tsp_01005
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Entry
Tsp_01005 CDS
T01609
Name
(RefSeq) HORMA domain-containing protein 1
KO
K12778
meiosis-specific protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_01005
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
Tsp_01005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HORMA
FtsK_gamma
PHD
PHD_2
PHD_5
Zn_peptidase
Motif
Other DBs
NCBI-GeneID:
10904653
NCBI-ProteinID:
XP_003376726
LinkDB
All DBs
Position
Unknown
AA seq
509 aa
AA seq
DB search
MSEKNKKSSIAMDVLPIDSTGPEKSLMYLKQLLAISVSTICYLRNLFPADAFCNREFEDT
KLQILVSNDPKVLRLIHCMTGCYEAIDKKYLRTIIFGICPREKDPENVVESYSFRITYHH
LGAIDLEFTSDSTGRQSYSTSVTKNSTIQLLRSINLMCQNLEPMPENTFISIKLLYYDER
TPADYEPPGFLPCRNTDFRYSRSVHKSPIAVDLGKVHTNFCTVSLRVKSTLYFPYDDDDD
SAVENNRSPLMQFGIESETMKRQCTVIEQENEEEVENLTEEHEDIFVDVFDDSSERKHPR
KVAVVSQHCSCICGKQKVESAMLYCEYCNTVQHAICYGKVKVSKINEERTACLQCCLANR
TLICHDGILLTNPRGVKALCLYRRALMLLKNSNQMTISLMTFQRELEISHNIAGQLCQQL
VNDGCLFGKSSSVFYVQRYVVSILSSKIICFDNADKSKSNTPQRLPLRELNQLNLRSSDA
TRKRTAKLMSETRPPQTAGIKRKSTVKKK
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaaaaataaaaagagttctattgcaatggacgttctgcccatcgacagtacc
ggtccggaaaaatcgcttatgtacttgaaacaacttttggctatatctgtatcaacgatc
tgctatttgagaaatttgtttcccgccgatgcattttgtaatagagagttcgaagatacg
aaacttcaaattcttgtcagcaatgatccaaaagtgctgaggttgattcattgtatgact
ggttgttatgaagctatagataaaaaatatttacgaacaattatttttggcatttgtcca
agagagaaagatcccgaaaatgttgtggaatcgtactcgttcagaattacatatcaccac
ctcggagccattgatctagaatttaccagtgattccactggtcggcagtcctattctaca
tcggtgaccaaaaattccactatacaactgttgagaagcatcaacttgatgtgccagaat
ctggaacccatgccagagaatactttcatatcgatcaagcttctttactacgacgaacga
acaccggctgattacgaaccgccaggcttcttaccatgtcggaacacggactttcgatat
tctcgatcggttcataaatcaccaatagctgtcgacttgggaaaagttcatacaaacttc
tgcacagtgagtttgcgtgtcaagtctacactgtattttccctatgacgatgacgacgat
tcggccgttgaaaataatcgatctccattgatgcaatttggaattgaatccgaaacgatg
aaacggcagtgcactgtgattgaacaagaaaatgaagaagaagtggaaaatttgacagaa
gagcatgaagacatttttgtcgacgtgttcgatgattcaagtgaacgaaaacaccccaga
aaagttgctgttgtaagtcagcattgcagctgcatatgcggaaagcagaaagttgagagt
gcaatgctttattgcgaatattgcaatacagtacagcatgcaatttgttatggaaaagtg
aaagtttccaaaatcaacgaggaaaggacagcttgtttgcagtgctgtttggctaatcga
acgttgatttgtcatgatggaatattgcttaccaatcccagaggagtgaaagcgttgtgc
ttgtaccgtagagcgctgatgttgttgaaaaattcgaatcaaatgaccatcagcttgatg
acgtttcaacgtgaattagaaattagccacaacatagctggacaactttgtcaacagttg
gtgaatgatggatgcttgtttggaaaaagttcttctgtattttacgtgcagcgttacgtc
gtctcgatattgagtagtaaaataatttgctttgacaatgctgacaagtcaaagtcgaac
acaccgcaaagacttccactccgagaattgaatcagctcaatttgagaagctcggacgcg
accaggaaaaggactgccaaattgatgtccgaaactcgaccaccacaaactgcaggcata
aaaaggaaaagtaccgtgaaaaaaaagtaa
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