KEGG   Trichinella spiralis: Tsp_01007a
Entry
Tsp_01007a        CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
tsp  Trichinella spiralis
Pathway
tsp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tsp_01007a
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsp03021]
    Tsp_01007a
Transcription machinery [BR:tsp03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     Tsp_01007a
SSDB
Motif
Pfam: RPC5 HMG14_17
Other DBs
NCBI-GeneID: 10904907
NCBI-ProteinID: XP_003376818
LinkDB
Position
Unknown
AA seq 559 aa
AFHLSMLKGTAWVQLSQCEQNEVTLSNEGTSSIRVSYEESCSEDEELEISSPTLKALSDE
NQKSKSVLETVRVRFENVNTPGPSNSTRSMHSNALRHVERIPTKGWHLLKVNKNLSIDEK
LSLLTLDKTIAEESWKVKQEIFDEEFNLLENFFENEIVDTSVPIKVEETQKSLPELVFAL
LKSGMVVRFFDLINQLPYDVNFDEVLSLLNEYALLVQGCWVLKSEFSIEEGFEDARTDIQ
RTLLLAARDFLLYKFTKNRVVLLRELERMLPIEEHIWRYFLMEIARMVPRLGWQFVRPKD
INFLHSFPKVVQKQEEIWKNKYVHLVKVISDYENEMINKKAVVVSTSRKVKSSKSASSDS
SCKGSAVVKSSPAPSHPEPKVKKQPSRNADKNTVGGSVVVVKVEPGTESANANDHFHRLD
GKKQKVVAIDKQNDLQAELCSMFQRKRVYSLDFITSRVISKFPAVCDEMIEQCSEAIGAI
RIEGGKMDKVFYGFIGIDTCRELRRQIINMLRDRGRFRFKTFKQACLEKGLTSQTDEQLK
SLLKEYCDSKYGVYYLMET
NT seq 1682 nt   +upstreamnt  +downstreamnt
acgcttttcatttgagtatgttgaaaggcacagcttgggtgcagttatctcagtgcgagc
aaaatgaagtgaccctgtccaatgagggaacaagctcaatcagggttagttatgaagaaa
gttgcagtgaagatgaggaattggaaatttcttcaccaactctaaaagcgctaagcgatg
agaaccaaaagtcgaaaagcgttctggaaacggtccgtgtacgttttgagaacgtcaata
cgcccggcccgtcgaattcgacaagatcaatgcattcgaatgctttgcgccatgttgagc
gaatccccacgaaaggatggcaccttttgaaagtgaataagaatttaagcatcgacgaaa
agttgtcccttctcacgttggacaaaacaatcgccgaagagagttggaaagtgaagcagg
aaattttcgacgaagaatttaatttgttggaaaattttttcgaaaacgaaatcgtcgata
caagtgttcccatcaaagttgaggaaactcaaaagtcgttgccggaattggtattcgcac
ttttgaaatcaggtatggtggttcgatttttcgatttgatcaatcagcttccgtatgacg
tgaatttcgacgaagttttgtcattgttgaacgaatacgctttacttgttcagggctgtt
gggtgttgaaaagtgaattttcaatagaagaaggtttcgaagatgcgaggaccgatattc
agcgcacgttgttgttagctgcaagagattttttgttgtataaattcactaaaaatagag
ttgtgttactgcgagaactggaacgtatgttgccaattgaagaacatatatggcggtatt
ttctgatggaaattgcgcgcatggttccccgacttggttggcaatttgttcgtccaaaag
atattaattttttacacagctttccaaaagttgtccaaaaacaggaagagatttggaaga
ataaatatgtgcatttagttaaagtgatttctgattatgaaaatgaaatgataaataaga
aagctgttgttgttagcacgtcaaggaaagtgaaatccagcaaatcagcatcttcggatt
cttcttgcaaagggtcagcggtggtgaaatcatcaccggcgccgtcgcatccggagccga
aggtgaaaaagcagccgtcacgcaatgccgacaagaatacagtgggcggcagtgtggtcg
tcgtcaaagtggaacctggaaccgagagcgcaaatgcaaacgatcacttccatcggttgg
atgggaaaaagcagaaggttgttgctattgataagcagaacgacttgcaggcggaactgt
gttccatgttccagaggaagcgcgtctacagtctggattttataaccagtcgtgtgatca
gcaagtttccggctgtatgcgacgagatgatcgaacagtgttcagaagcgattggtgcga
ttcgaatcgaaggcggcaaaatggacaaggtgttttatggattcataggaatcgacactt
gtcgagagttacgacggcagatcatcaatatgcttcgagataggggacgttttcgattta
aaaccttcaagcaagcctgtttggagaagggtctgacctcgcaaactgacgaacaattga
aatcattgctcaaggaatattgcgattcgaaatatggcgtttattatctaatggaaacgt
ag

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