KEGG   Trichinella spiralis: Tsp_01051
Entry
Tsp_01051         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K14295  nuclear pore complex protein Nup50
Organism
tsp  Trichinella spiralis
Pathway
tsp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Tsp_01051
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_01051
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Tsp_01051
SSDB
Motif
Pfam: NUP50 Ran_BP1
Other DBs
NCBI-GeneID: 10905138
NCBI-ProteinID: XP_003376887
LinkDB
Position
Unknown
AA seq 601 aa
MKSKRTADSELTREEFERDDDPRTPEEQSSGPMARASDEVIRKRLIKKVSRRSAANAEIT
GSNPFKNFTGFTNPEGYLKSTQPPVEPTPVSDPSIVKPVIEEANITISNRNKEFSSSAAV
LVQNDSELQVKQKSALANVQALNSRWLMAMFERFEEMPFLDFSKVAHDYIKEMRILIDTC
VSLGIKVRDENQQLPRAQTTGVGNANSFSDSSEIQKPKDNTSNVTVTEPKKIAPVEEEKS
DKQKCMVKIYKVAPPGLSEANRQMNTPKVKETGAGKVLPCPVKLSPKTIGDEGTSPKGLF
KIQQVGEKIVAKNDANLTTEKKTNDNSPSKSADCAKESSSGTLSPQNFSFSIKSTTTTSS
SFGTTFGGALCDQLNKEVSASKLPFAFPSVSTSSSTLTTPNRYFSSPTTIAATFNQSNTA
TTTPSVFGGFAAASSEQEVLQSNIAYAMIVNVLFVLLIDDEKYEPPKVESVQVEEEGSVY
SEKCKLYFKPDKEFVMKGIGFVYLKPNDNGKVQLIVRDNTPLGNLYLNIFLDELTPCQKI
SKNKIMLTAVPNPPIEGKNENEVVTYLINMKSDKEADTLFDLINEAKAGVEVIFPFLRAC
F
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgaagtcgaagcgaaccgccgactctgaattgacacgagaagaatttgaacgcgatgat
gatccacgaacgcctgaagaacagagtagtggtccaatggccagagcttctgatgaagtg
ataaggaaacgtttgataaaaaaagtatcaagacgcagtgctgctaatgcggaaattacg
ggatcaaacccattcaaaaattttactggcttcacaaatcccgaagggtacttgaagtcg
acgcaaccgccggttgagccaactccagtttcagatccaagcattgtcaagcctgttata
gaggaagcaaatatcaccatcagcaacaggaataaagaatttagtagtagtgcagcagta
ttagtgcagaatgattcagaattgcaagtgaagcaaaagtccgccttggccaacgtgcag
gcgttgaattccagatggttaatggccatgtttgaacgttttgaagagatgccgtttttg
gatttttcgaaagtagcgcatgattatattaaagaaatgcggattcttattgacacttgc
gtgtcattgggcattaaagtgcgggatgaaaaccaacaattgccaagagcacaaactact
ggcgtgggcaatgcgaactcatttagtgattcgagtgaaatacagaagcccaaagacaac
acttcgaacgttactgtaactgagccaaaaaaaattgctcctgtcgaagaagagaaatct
gacaagcagaaatgtatggtgaaaatttataaagtggcgcctccagggctatctgaagct
aatcggcagatgaatacacctaaagtgaaggaaaccggtgcgggaaaagttctcccttgt
ccagtgaaactttctccaaagaccattggtgacgaaggtacttcaccaaaaggattattc
aaaattcagcaagttggtgagaaaatcgtggcgaaaaatgatgcaaatttgacaacagaa
aagaaaactaacgacaatagtccttcaaagtcggcagattgtgcaaaagaatcttcaagt
ggaactctgagtccgcagaacttttcattttccataaaatccactacaactacatcttct
tcgtttggtacaactttcggcggtgcattgtgtgaccaactgaacaaagaagtatccgca
tccaaattgccgtttgcttttccaagcgtaagcacaagctcatcaacattgactacgccg
aatcgttatttttcaagtcctaccaccattgctgctactttcaatcaatcgaatacagct
acaacaactccatctgtatttggaggatttgcggctgcctcgtctgaacaggaagttttg
cagtcgaatattgcatatgcgatgattgtcaatgtactgtttgtgttattaatagatgat
gaaaagtatgaaccaccgaaagtggagtcagtgcaagttgaagaagaaggcagcgtttat
tcggaaaaatgcaaattgtacttcaagccagacaaggaatttgttatgaaaggaattgga
tttgtttatttgaagccaaacgacaacggcaaagtgcagttgatcgtccgcgacaatacc
ccgttgggaaatttgtatttgaacatatttttggatgaattgacaccgtgtcaaaaaatc
agcaagaacaagattatgctcactgctgttccaaatcctccaattgaagggaaaaatgaa
aatgaagtggtgacttatttgataaatatgaaatctgataaagaagccgatacactgttc
gatctaatcaatgaagctaaagctggggtagaagtgatttttccatttttaagagcctgc
ttttag

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