Trichinella spiralis: Tsp_01051
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Entry
Tsp_01051 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K14295
nuclear pore complex protein Nup50
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_01051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_01051
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Tsp_01051
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Motif
Other DBs
NCBI-GeneID:
10905138
NCBI-ProteinID:
XP_003376887
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MKSKRTADSELTREEFERDDDPRTPEEQSSGPMARASDEVIRKRLIKKVSRRSAANAEIT
GSNPFKNFTGFTNPEGYLKSTQPPVEPTPVSDPSIVKPVIEEANITISNRNKEFSSSAAV
LVQNDSELQVKQKSALANVQALNSRWLMAMFERFEEMPFLDFSKVAHDYIKEMRILIDTC
VSLGIKVRDENQQLPRAQTTGVGNANSFSDSSEIQKPKDNTSNVTVTEPKKIAPVEEEKS
DKQKCMVKIYKVAPPGLSEANRQMNTPKVKETGAGKVLPCPVKLSPKTIGDEGTSPKGLF
KIQQVGEKIVAKNDANLTTEKKTNDNSPSKSADCAKESSSGTLSPQNFSFSIKSTTTTSS
SFGTTFGGALCDQLNKEVSASKLPFAFPSVSTSSSTLTTPNRYFSSPTTIAATFNQSNTA
TTTPSVFGGFAAASSEQEVLQSNIAYAMIVNVLFVLLIDDEKYEPPKVESVQVEEEGSVY
SEKCKLYFKPDKEFVMKGIGFVYLKPNDNGKVQLIVRDNTPLGNLYLNIFLDELTPCQKI
SKNKIMLTAVPNPPIEGKNENEVVTYLINMKSDKEADTLFDLINEAKAGVEVIFPFLRAC
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgaagcgaaccgccgactctgaattgacacgagaagaatttgaacgcgatgat
gatccacgaacgcctgaagaacagagtagtggtccaatggccagagcttctgatgaagtg
ataaggaaacgtttgataaaaaaagtatcaagacgcagtgctgctaatgcggaaattacg
ggatcaaacccattcaaaaattttactggcttcacaaatcccgaagggtacttgaagtcg
acgcaaccgccggttgagccaactccagtttcagatccaagcattgtcaagcctgttata
gaggaagcaaatatcaccatcagcaacaggaataaagaatttagtagtagtgcagcagta
ttagtgcagaatgattcagaattgcaagtgaagcaaaagtccgccttggccaacgtgcag
gcgttgaattccagatggttaatggccatgtttgaacgttttgaagagatgccgtttttg
gatttttcgaaagtagcgcatgattatattaaagaaatgcggattcttattgacacttgc
gtgtcattgggcattaaagtgcgggatgaaaaccaacaattgccaagagcacaaactact
ggcgtgggcaatgcgaactcatttagtgattcgagtgaaatacagaagcccaaagacaac
acttcgaacgttactgtaactgagccaaaaaaaattgctcctgtcgaagaagagaaatct
gacaagcagaaatgtatggtgaaaatttataaagtggcgcctccagggctatctgaagct
aatcggcagatgaatacacctaaagtgaaggaaaccggtgcgggaaaagttctcccttgt
ccagtgaaactttctccaaagaccattggtgacgaaggtacttcaccaaaaggattattc
aaaattcagcaagttggtgagaaaatcgtggcgaaaaatgatgcaaatttgacaacagaa
aagaaaactaacgacaatagtccttcaaagtcggcagattgtgcaaaagaatcttcaagt
ggaactctgagtccgcagaacttttcattttccataaaatccactacaactacatcttct
tcgtttggtacaactttcggcggtgcattgtgtgaccaactgaacaaagaagtatccgca
tccaaattgccgtttgcttttccaagcgtaagcacaagctcatcaacattgactacgccg
aatcgttatttttcaagtcctaccaccattgctgctactttcaatcaatcgaatacagct
acaacaactccatctgtatttggaggatttgcggctgcctcgtctgaacaggaagttttg
cagtcgaatattgcatatgcgatgattgtcaatgtactgtttgtgttattaatagatgat
gaaaagtatgaaccaccgaaagtggagtcagtgcaagttgaagaagaaggcagcgtttat
tcggaaaaatgcaaattgtacttcaagccagacaaggaatttgttatgaaaggaattgga
tttgtttatttgaagccaaacgacaacggcaaagtgcagttgatcgtccgcgacaatacc
ccgttgggaaatttgtatttgaacatatttttggatgaattgacaccgtgtcaaaaaatc
agcaagaacaagattatgctcactgctgttccaaatcctccaattgaagggaaaaatgaa
aatgaagtggtgacttatttgataaatatgaaatctgataaagaagccgatacactgttc
gatctaatcaatgaagctaaagctggggtagaagtgatttttccatttttaagagcctgc
ttttag
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