Trichinella spiralis: Tsp_01075
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Entry
Tsp_01075 CDS
T01609
Name
(RefSeq) paired box protein Pax-6
KO
K08031
paired box protein 6
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_01075
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
Tsp_01075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_23
HTH_Tnp_IS1
HTH_32
Homeobox_KN
DUF6115
HTH_28
Pas_Saposin
Motif
Other DBs
NCBI-GeneID:
10905114
NCBI-ProteinID:
XP_003376863
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MRNDKKGFSDLHRTSFGVRSEQKAVRTIADSSYEDIMKLKFFILGHTGVNQLGGVFVNGR
PLPDSTRQKIIELAHQGARPCDISRILQVSNGCVSKILCRYYETGSIRPRAIGGSKPRVA
TNKVVDKIADYKRECPSIFAWEIRDRLLQENVCNQDNIPSVSSINRVLRNLAAQKEQQAA
QQEIYDKLRMSWNGGHSWLYSPAAAAAIPQPNAHVTSMNPSAPNFFTNFAVTPSVESKKE
FERTHYPDVFARERLAGRINLPEARIQVWFSNRRAKWRREEKLRNQKRVFDCGNTTTTNP
SHQNTGISSVSTAQALSGVANFSMTPSLAGNSADVSSYSCMLPGAPPSRVYDPLHAYRSF
GAASQNTGHQMSSGPVNTAGNVSAGLISAGVSVPLQVPGQVLTDMSGCTVTQYWPARLQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacgacaaaaaaggcttctctgacctacatcgtactagcttcggcgtacgatct
gagcaaaaagcggtcagaacaattgctgatagttcttatgaagatattatgaagctcaaa
tttttcattttaggacacacaggagttaatcagttgggtggagtgtttgtcaatggaaga
ccattgcctgactcaactcgacaaaagattatcgaacttgctcatcaaggcgcacgtcca
tgtgatatctcacgaattttacaagtatccaacggatgtgtaagcaaaatcctatgccgt
tattatgagactggctcaatacgccctcgagcaattggcggtagtaagccccgtgtggcc
actaacaaagtggtcgacaagattgctgactataagcgtgaatgtccatcaatttttgca
tgggaaattcgtgaccgtctgttgcaagaaaatgtctgcaatcaagacaacattccaagt
gtatcatctataaatcgggtacttcgaaatttggccgctcaaaaagagcaacaggcagct
caacaagaaatttatgacaaacttcgcatgtcatggaacggaggtcattcatggctttat
tcaccagcagctgcagccgctattccccaaccaaatgcccacgttacatccatgaatcct
tctgcgccaaatttttttacaaattttgcagtcactccttcagttgaatcaaaaaaagaa
ttcgaacgcacccattacccagacgtgtttgcacgagaacgtcttgcgggccgcatcaat
ttgccagaagcaagaatacaggtctggttttcaaaccgacgagccaaatggcgccgtgag
gagaagctgagaaatcagaagcgagtttttgattgtggaaacacgacgacaacaaatcca
agtcaccaaaacacagggatatcatcagtaagcacagcacaagcactgagcggcgtggca
aatttcagtatgactccgagcttagccggtaacagtgccgatgtgagcagctattcctgc
atgcttcctggtgctccaccctcaagagtttatgatccgcttcacgcgtatcgctctttt
ggagctgcatcacaaaatactggccatcaaatgtcatccgggcctgttaacaccgcagga
aatgtttcagctggtttgatctctgctggagtatcagttcccctacaagtgccaggtcaa
gtactgacagacatgtccggctgtactgtgacgcaatattggcctgctagattgcagtga
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