Trichinella spiralis: Tsp_01086
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Entry
Tsp_01086 CDS
T01609
Name
(RefSeq) proline--tRNA ligase
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Tsp_01086
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsp01007
]
Tsp_01086
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsp03016
]
Tsp_01086
Enzymes [BR:
tsp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
Tsp_01086
Amino acid related enzymes [BR:
tsp01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Tsp_01086
Transfer RNA biogenesis [BR:
tsp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Tsp_01086
Prokaryotic type
Tsp_01086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
Zf_2nd_IFT121
zf-C3HC4_3
Zn_ribbon_8
XPA_N
HypA
DZR_2
DZR
Zn_ribbon_6
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
10905103
NCBI-ProteinID:
XP_003376852
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MISKSQRLMLDNGLIEYVGGKGLFHYLPVGLRALEKLCIIIRHEMDLLGAGRMALSNLCE
RSVWEQTGRWEEVSAELLRLKDRKGKEYCLCPTHEESVTSLISRFSPITSSRLPLLLYQI
TLKYRDEPNPRFGLARAREFFMKDMYSFDLDTKSAMKTYDAVNKAYFSIFQTLGIKVHRV
EAAVGSIGGNLSHEFHCESQYGEDYILMCEKCQKKFTEEVLVNSTTCPVCNEPFQKVRSL
ELAHTFFLGEKYSQALGATVTCNPGSPIPLQMGCFGIGISRLLAAIVDYFSSDEEIRWPL
CIAPYKVCVIPPKNGSREYPATPMALHLAEQLSSLANFNEEIVYDDRTHQTVGTRLRDAK
RRGYPYVIVANKTVFNKSSPKFELHCTATDEVLEVTHAELFQLKRRFTFTEKT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgattagcaaaagtcaacggcttatgcttgataatggtctgattgaatacgtcggcggg
aagggtttgttccattatttgccggtcggtttgagagctttggaaaagctgtgcatcatc
attcgacatgaaatggatcttcttggagccggtcgtatggctttgtcgaatctatgcgag
cgcagcgtttgggaacagactggtcgatgggaagaagtttctgctgaacttcttcggttg
aaagatagaaaaggaaaagagtattgtctttgtccaacccacgaagaatcagttaccagc
ttgatcagcagattttctccgatcacaagcagtcggcttcctctgctactttaccaaatt
actttaaaataccgtgatgaaccaaatccaagatttggacttgctcgtgcaagggaattt
ttcatgaaagatatgtacagcttcgacttggacaccaaatccgctatgaaaacatacgac
gctgtaaataaagcatactttagcatttttcaaactctcggcatcaaagtgcaccgtgtt
gaagcggctgttggaagcatagggggaaatttgagtcatgaatttcattgtgaaagtcag
tatggcgaagattacatcctgatgtgcgaaaaatgccagaaaaaattcacggaagaggta
cttgttaattcgactacttgtccagtttgcaatgagccgtttcaaaaagttcgttcattg
gagcttgcgcacacatttttcttaggtgaaaaatactctcaagcattaggtgctaccgta
acctgcaatcccggaagtccaataccactgcagatgggttgttttggaataggcatctcc
cggctgttggcagcgattgttgactacttttctagtgatgaagaaattcgttggccactt
tgtatagcaccttataaagtttgtgtcattcctccgaaaaatggcagtcgagaatatccg
gctactcctatggctttgcatctggccgagcaactgtcctctttagctaatttcaatgag
gaaattgtttatgacgacagaacacatcagactgtcggtacacgactgcgcgatgctaaa
cgtagaggatatccgtatgtgatcgtagccaacaaaacagtattcaacaaatcttcgccg
aagtttgaattacattgcactgctactgatgaagttctcgaagtgacacatgcagaattg
ttccaactaaagcgtagattcactttcacagagaagacataa
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