Trichinella spiralis: Tsp_01332
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Entry
Tsp_01332 CDS
T01609
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
tsp
Trichinella spiralis
Pathway
tsp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Tsp_01332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_01332
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_01332
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
Tsp_01332
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
Tsp_01332
RSF complex
Tsp_01332
WICH complex
Tsp_01332
B-WICH complex
Tsp_01332
NORC complex
Tsp_01332
BRF complex
Tsp_01332
NuRF complex (fruit fly)
Tsp_01332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLIDE
HAND
Myb_DNA-binding
CHDII_SANT-like
Motif
Other DBs
NCBI-GeneID:
10911147
NCBI-ProteinID:
XP_003377143
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
RIVERAENKTALGHCGNQQGRLAETQKSLGKDEMLTMIRHGADHVFAGKESEITEEDIDC
ILARSEEKNEALKRRLEELGESSLRNFTLDTQEASSVYQFEGKDYRGKQRKALGYWIEPP
KRERKANYQIDAYFRDALRPHVEPKAPKAPRPPKQPQIQDFHFYPPRLLHLCEREVYYYR
KTIGYKVPLMQDLPPEEALKRQEDEQKKIDEAVPLTEEELAEKEQLLHCGFSNWSRREFN
QFIKANEKYGRNDVENIAQEVDGKSPDEVREFYKVFWARCCELADIDRVLGQIERGEARI
QKRLSVKRALESKIARYRAPFHQLRVQYGTNKGKNYTEEEDRFLVCMLHEIGFGKENLYE
ELRQAIRVAPQFRFDWFLKSRTAMELQRRCNTLISLIEKEMHDVEQNDKSSGGGRNRNNC
KSGRSGSSAATPEKRKTDVQDGKRSSRRSKA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
cggattgtggaacgtgcagaaaataaaactgcgcttggacactgtggtaatcagcaaggg
cggctggccgaaactcaaaaatctcttggaaaagacgagatgttgaccatgattcggcat
ggtgcggatcatgtgtttgcaggaaaggagtcggaaattaccgaagaagatattgactgc
attttggcgagatccgaagaaaagaatgaagctttgaagcgtcgtttagaagaactggga
gaaagttctttgcgaaacttcactttggacacgcaagaagcttcttcggtgtatcaattt
gaagggaaagattatagaggcaaacagcgaaaagctcttggctattggattgagcctccg
aaaagagaacgcaaagcgaattatcaaatcgatgcttatttcagagatgcactccgtcca
catgtggaaccaaaagcacccaaagctccaaggccaccaaagcaaccgcagatacaagat
tttcacttctatccacctcgtttgttgcatctctgtgaaagagaagtctattattatcga
aagactatcggttataaggttcccctgatgcaagatcttccacctgaagaagctttgaaa
cggcaagaagatgaacaaaagaaaattgatgaagctgtaccactgacagaagaagaattg
gctgaaaaggagcagttgttgcattgtggatttagcaactggtctcggcgggaatttaat
cagtttatcaaggcgaatgaaaaatacggccgtaacgatgttgaaaatattgcccaagaa
gtggatggcaaatctcctgatgaggttcgagaattttacaaagtattttgggctcgttgt
tgtgaactggcggatattgaccgtgttttgggtcaaattgaaagaggagaagctcgaatt
cagaagcgtctcagtgtgaaacgtgcgttggagtcgaaaattgcacgatacagagcaccg
ttccatcagctgcgtgtacagtacggtacaaataaggggaaaaattataccgaagaagaa
gacagatttttggtttgcatgttacacgaaattggctttggaaaggaaaatttgtatgaa
gaattgcgacaagcaatccgagtggcaccacagtttcgatttgactggtttttgaaatct
cgaacagctatggagttgcaacgacgatgtaacactttgataagcttaattgaaaaagaa
atgcacgacgttgagcaaaacgacaaaagcagtggcggaggacgaaatcgaaacaattgc
aaatctggacgaagtggttcgtcagcagctacccctgaaaaacgcaaaactgatgtacaa
gatggaaaaagaagcagtcgtagatcgaaggcttaa
DBGET
integrated database retrieval system
