Trichinella spiralis: Tsp_01353
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Entry
Tsp_01353 CDS
T01609
Name
(RefSeq) putative RNA recognition motif protein
KO
K13201
nucleolysin TIA-1/TIAR
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_01353
03041 Spliceosome [BR:
tsp03041
]
Tsp_01353
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
Tsp_01353
Spliceosome [BR:
tsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
Tsp_01353
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_MUD2_C
RRM_Nup35
RRM_5
RRM_3
PHM7_cyt
Calcipressin
Motif
Other DBs
NCBI-GeneID:
10911161
NCBI-ProteinID:
XP_003377157
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MIVLPVPHLHTSAVQQQHSTTVFAQSSLNSSSGVAVSSDASPLTMTNNYSAVYEGLPIFL
LPNTKAVLSPLKLQEMRVNWATSPGTQAKVDTSKKHLLLMEKFRKRPPLHQIVRADSLLF
ISSDVKVIRDLQTLKSKGYGFVSYVSHDDAERAIEQMNGQWLGRRTIRTNWATRKPGLPA
QNLGQLTFDDVMAQSSPQNTTVYVGSVAANTTGTHDDLRRIFARFGSILEVRVFKQQGYA
FVRFDNKESAAHAILNITGTEINGSSVRCSWGKEGGLAASNNTAPNYGYGYNFNSFSNPP
VASHSAPANPNFWNQYYTSYMPPHGQPGPNPTPAVYPQQWQPNYWPPQGQQQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatcgttttgcccgtgcctcatttgcatacatctgccgttcaacagcaacattccacc
accgttttcgctcagtcttctttgaacagtagtagcggcgttgccgtctcttcggacgct
tcgcctctgacgatgacgaataattattcggcagtttacgagggtttgcccatatttctt
ctaccaaacaccaaggcagtgttgtcaccgttgaagttgcaggaaatgcgcgtcaactgg
gccacgtcaccgggaacgcaggctaaagtcgacacgagcaagaagcatttgctccttatg
gagaaatttcgtaagcgaccaccactgcatcagattgttcgtgctgattcacttttgttc
atttctagtgatgtaaaagtgattcgagatttgcagacgttgaaatcgaaaggttatggc
tttgtttcatacgtatcgcacgatgatgcagaacgtgctattgaacaaatgaatggtcaa
tggcttggccgacgtacgattcgcacaaattgggcaacacgtaaacctggattgccggcc
caaaatttaggacagttaacttttgacgatgtcatggcacagtccagtccgcagaacaca
actgtttacgttggtagtgtagccgctaatactacaggtacgcatgatgacttgcgccgc
atttttgccagatttggttcgattttagaagtgcgtgtttttaaacagcaagggtatgca
tttgttcgctttgacaacaaagaatcggccgcccatgctattttaaatattactggaact
gaaatcaatggatcgagtgttcgttgttcttggggaaaagagggaggattggcggcgtcg
aataacacagcaccaaattatggatatggttataattttaatagtttttcaaatccaccc
gtagcgtcccattcagctccagcaaatcccaacttttggaatcagtattacacaagttat
atgccaccacacggtcaacctggccccaatccaacaccggctgtgtaccctcagcagtgg
cagcctaactattggccacctcaaggacagcagcaatga
DBGET
integrated database retrieval system
