Trichinella spiralis: Tsp_01474
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Entry
Tsp_01474 CDS
T01609
Name
(RefSeq) testis-expressed sequence 10 protein-like protein
KO
K14827
pre-rRNA-processing protein IPI1
Organism
tsp
Trichinella spiralis
Pathway
tsp03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
Tsp_01474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_01474
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
Tsp_01474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ipi1_N
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
10911470
NCBI-ProteinID:
XP_003377302
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MGKSSRKGKRKMEDFQKVKLKLGKRLKKSNDTDTNFTAKRIVVRTQLKETGCREEITVGN
LTIQVGGGCSLLILFDDDDYFCSFVTKQKFALQLMNSFISNSVRLCQLNLSSILTSVLPL
LSSGQDRIRSAAVGLLKRVFNTVDSSLIGSYFPILESYLRCSITHVDVKVKLSALRTFDS
LIDSHPSFVATRSKLITFYVDLFVPDKSTSVLGRTVGGSKMMTTQLERCRVLWSFWKFLQ
AVNKAVTAEKHQTETSYLGPFCSTVLFDDKSGTVERHLVDSVGVILKNFQKLFEPLMSLW
LEVTSNSLSSRTESDLEIMYTVVGIINCLFRLVDYSSKYAEEAAVAVKEFRKLFRQVRNY
ERFVVQFPCHRGTEKRTANKDIPHEEEDIFAGIDVCLQLNIALCEMFCFVHRFVGLQFPH
QLCVEYIFKVVEQRRLGSEMIESLFDVLGQFPVDDKSTTTTESLLELFFSNRSSITVKLS
LLNLINTSRAIGCRCTSATDDLLNYLLQLSDKLKPNHFSRFDNVVVEYCEQQIQNSVPEQ
TKETIELLTLSCFIHSGCSGSTTEQKIVRLLYNLVPLSKSALKQLFTFGRACDANFQRLL
YVLEILFSRYSQTWDKLSYEQRAVWIFFIMAILHLCKVEEQRNGHNRAVMFVSESPASPE
LRINLSLECWLRSIKCEKEIRCIFEQYCDARINWFDEISSVSCET
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcgagtcgcaaggggaaacggaaaatggaagattttcaaaaggtgaaattg
aaattgggaaaacgattgaaaaagtcaaacgacaccgataccaatttcaccgcaaagagg
atcgtcgttcggacccaactgaaagagacaggttgccgagaagaaataaccgttggcaat
ttgacaattcaagtaggaggaggatgttcgttgttgatattgttcgacgatgatgattat
ttttgctcttttgttacgaagcagaaatttgccttgcaattgatgaacagtttcatttcg
aattcggttcgattgtgccagttgaatttgtcgtccatactgaccagtgttttgccgttg
ttgtccagtggtcaagatcgaattcgatcggctgcagttggattgttgaagcgtgttttc
aacacggtcgactccagtctgatcggttcctattttccaattctggaaagctatttgcgt
tgcagcatcacccacgtggatgtgaaagtgaaattgtcggcgttgcgtacgttcgacagt
ttgatcgactcgcatccgtcgttcgtcgctacccgcagtaagttgatcacgttctacgtg
gatctgttcgttccggacaagagcacgtcagttttgggacgaaccgtcggcgggtctaaa
atgatgaccactcaattggaacggtgtcgggtgttgtggtcgttttggaaatttttgcaa
gcggtcaacaaagccgttaccgctgaaaagcaccaaactgaaacgtcctatttgggaccg
ttttgcagtacggtgttgttcgacgacaagagtggtactgtcgaacgacatctggtcgac
agtgttggagtgattttgaaaaatttccaaaaactcttcgaaccgttgatgtccctctgg
ttggaagtgacttcgaacagtttgtcttctagaaccgagagtgatttggaaatcatgtac
acagtggttggcataatcaactgcttgttccgacttgtcgactacagttcaaagtatgca
gaagaagccgctgttgcggtgaaggaatttcgcaaattgtttcgccaagtgcgcaactat
gaacgattcgtagtgcaatttccctgccatcgtggtacggagaagaggacggcgaacaag
gatatcccccacgaagaagaggatattttcgccggcatcgacgtttgcctgcaattgaac
atagccttgtgcgagatgttctgctttgtgcatcggttcgtgggtttgcaatttccacac
caactctgcgtcgaatacattttcaaagttgtcgaacagaggcgcttgggttcagaaatg
atcgaatcattgttcgacgttcttgggcagtttcctgtggacgacaagtcgaccaccacc
actgagagtttgttggaattgtttttcagcaatcgttcgtcgataactgtaaaactttct
ctgctgaatttgatcaacactagccgggcgatcggctgtcggtgcacttcggctacggat
gatctgttgaattatttgttgcagctcagtgacaagttgaaaccgaatcatttttctcgt
ttcgacaacgttgtcgtcgaatactgcgaacagcagattcagaactcagtcccagagcaa
acgaaagagacgatcgagttgttgacgctgagctgttttattcacagtgggtgcagcgga
tcgaccacagagcagaaaattgtccgtcttttgtacaatttggtacctttgtcgaaaagt
gccttgaaacagttgttcacttttggccgtgcttgtgatgcaaatttccaacgtctgctc
tacgtgttggaaattttattttcgagatatagtcaaacgtgggataagttatcgtacgag
cagcgggctgtttggatttttttcatcatggcaattttgcatttgtgcaaagttgaagag
cagcggaacggacacaacagagccgtgatgtttgtcagcgaatcgccagcgtcgcctgaa
ttgagaattaatttgtcgttggaatgttggctcagaagtataaagtgtgaaaaagagatt
cgttgcatatttgagcagtattgcgatgcgcggattaattggttcgacgagatttcttca
gtcagttgtgaaacatga
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