Trichinella spiralis: Tsp_01524
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Entry
Tsp_01524 CDS
T01609
Name
(RefSeq) putative leucine Rich repeat-containing domain protein
KO
K14319
Ran GTPase-activating protein 1
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_01524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_01524
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Tsp_01524
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_8
Mus7
Cwf_Cwc_15
RXT2_N
Nop14
Sigma70_ner
CobT
Autophagy_act_C
Motif
Other DBs
NCBI-GeneID:
10911486
NCBI-ProteinID:
XP_003377318
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MKCIYTLITPELRQLATVIVQAMVSSFFDKTQIMAESDIDKINEQIKKLDVVDGGTFSIA
GKGLFYDDDDKIDNLVKSLKDASFEKLNLSGNSIGIKAAAAIGDVLKLNSSIKSKQNFNY
TFCAVFGCQKHIFDAIVESGAKIEMLDLSDSAFGKIGADELVRFFSSPSAWSLHTLLLHN
NGLGIGGGQVIANALKTAHYNSKMANVKFNLKTVVIGRNRLENAGAMALADAFQTIGTLE
EIVMPQNGITGPGITELLKAFSKNPSLKKIDLSDNTFSKDAAFSLKDMLKQLKQLEFVNF
DDCLLRNHCAEHLAQDNQFGEKGVKVIKNIASDLGLADFLGSLSEDDGSYQSGSGEEEEE
EEEEDDDDDDDDDEEDEEEMSEEEFVVVESNSLNIYSPAELIEMLQTEPKLEHLLALQDE
HTKEEFLKILTVFHFY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtatttatacattaattacaccggaattgcgtcaactggctactgttattgta
caagcaatggtgagttcattttttgacaaaactcaaataatggctgaatcggacatagat
aaaataaatgaacagatcaagaagttagatgtagtcgatggtggtactttttcaattgct
ggcaaaggcttgttttatgatgacgacgataagattgataacttagtaaaatctttgaaa
gatgcatcttttgaaaaattgaatttatctggaaattctattggaatcaaagctgcggct
gcaattggtgatgttttgaaattgaacagttcgataaaatcgaagcagaatttcaattat
acattttgtgcagtgttcggatgtcaaaagcatatatttgatgcgattgtcgaatccgga
gctaaaattgaaatgttagatttatcggatagcgcgttcggaaaaattggcgctgatgaa
ttggtgaggtttttcagcagtccttcagcttggtcgttgcacactttgttattgcacaac
aacggactcggcattggcggaggacaagttattgctaatgctctgaaaactgcacattac
aacagtaagatggcaaatgtgaaattcaacttgaaaactgttgtcatcggtcgaaatcgt
cttgaaaatgcaggcgcaatggctttggcggatgcttttcagaccattggaacactggaa
gaaatagtaatgccgcaaaatggcatcacaggtccgggcattactgaattattgaaagca
ttctcaaaaaatccatctttgaagaagatcgatttaagtgacaatacattttccaaagac
gctgcattttctttgaaagacatgctgaaacaattgaaacagttggaatttgtcaacttt
gacgattgtctgcttcgtaatcattgtgctgaacatctagcccaagacaatcaatttggt
gaaaaaggcgtcaaagttattaaaaatatcgcgagcgatttgggtttggcggattttttg
ggttcgctcagcgaagacgacggtagctatcaaagcggcagtggagaagaggaggaggag
gaggaggaggaggacgacgacgacgacgacgacgacgacgaggaggacgaggaagagatg
tcggaagaggaatttgtcgtcgttgaatccaactctttgaacatttattctccagctgaa
ttgattgaaatgctgcaaaccgaaccgaaattggaacatcttcttgcactgcaagacgaa
catacgaaagaagaatttttgaaaattttgacagtattccacttttattag
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