KEGG   Trichinella spiralis: Tsp_01544
Entry
Tsp_01544         CDS       T01609                                 
Name
(RefSeq) putative cyclin domain protein
  KO
K15188  cyclin T
Organism
tsp  Trichinella spiralis
Pathway
tsp03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Tsp_01544
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsp03021]
    Tsp_01544
Transcription machinery [BR:tsp03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     Tsp_01544
    Brd4/P-TEFb complex
     Tsp_01544
    7SK RNP complex
     Tsp_01544
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N TFIIB TraI_2_C
Other DBs
NCBI-GeneID: 10911591
NCBI-ProteinID: XP_003377342
UniProt: E5SCT5
LinkDB
Position
Unknown
AA seq 533 aa
MESLGQSQESSRWLFSDERLAKCPSILAGYDQAKELAYRQQAANHIAEMGSKLSLSQLSL
NTAIVYMHRFYVFHSFQRFPRFDVAAAALFLSAKVEECPRKLEYVVKVSYALQYRDAPSL
ETNSPRYAEEAQKIITFENILLQTLGSINFMLSSLLGFDINVVHPHAHVVRCCQLIKAPK
DLAHSAYFFATDSLHWSTFCLRYRPAVVACICIHLACSWAKWEIPPSKEGKPWYEYVDPN
ITMDTLQELAHEFAGIRERLPDKYRLRRFVRREGQVVAVQGGEAGSETPGMANSTEFAQR
SVEAENVNLSASISSGHVSTTAGPCHNQPVLQSEQQEEQVGRGDANHLADPVTNNDDDGA
TTNLESKSSHHASQPHSVIDLKLYKERREREREANPTSGLDNAESKAQRKSFIPYLTNAA
KDQQSSGAAEIKPSYTSTSTVKEDTADHQKQPWQQIQQHQQPLPQHPQDGDGMLGAVNSV
AGNSRDAKNHKRHANMDDSALVKSKQPRSTVDSSAIRKSNGNDNAPPEAKFCV
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggaatctcttggacaatcgcaagaaagttcccggtggctgttttccgatgagagactt
gcgaaatgtcctagtattcttgcgggttatgatcaagcgaaggagctagcatatcggcag
caagctgctaatcatattgctgaaatgggttccaaattaagcttgagtcagttgtctttg
aatacggctattgtttatatgcatcgcttttacgtgtttcattcatttcaacggttccca
agatttgatgttgctgctgctgcgcttttcttgtctgcaaaagttgaggaatgtccccga
aaactagaatatgtggtaaaggtatcatatgccttgcaatatcgtgatgctccttcatta
gagaccaattcacctagatatgcagaagaggctcaaaaaattatcacttttgagaatatt
cttctgcaaacgttaggtagtataaattttatgctttcgtcgcttttagggtttgatata
aatgtggttcaccctcacgcgcatgtagtacgatgttgtcagttgatcaaagctcccaaa
gatttagcacacagtgcttatttttttgctactgacagcttacactggtcgaccttttgc
ctacgttatcgccctgctgtggttgcttgcatctgtatacatttggcgtgcagctgggca
aaatgggagattcctccatcgaaagaaggcaagccgtggtacgagtatgtggatccaaat
ataacgatggacactttacaagagcttgcacatgaatttgccggtattcgtgagaggcta
cctgacaaataccggcttcgtcggtttgttcgtcgtgaaggtcaggtagttgcggtgcag
ggtggtgaagctggctcagaaacacccggaatggccaattccacggaatttgctcaaagg
tccgtggaagcggaaaatgtgaatttgagcgccagcatctcatccgggcacgtgtcaact
accgccgggccgtgtcataaccagcctgtattgcagagtgagcagcaggaagagcaggtt
gggagaggtgatgcgaatcacctcgctgatccggtgacgaacaacgacgacgatggggct
acgacaaatttggaaagcaaaagtagccaccacgcttcccagccacacagcgttatcgac
ttgaaattgtacaaggaaaggcgggagcgtgaacgtgaagcgaatccaacctctgggttg
gacaatgcagaatcgaaagctcagcggaagagctttattccatatttgacgaacgctgcc
aaagatcagcagtcttccggtgcagctgaaattaaaccatcctatacgagcacaagcacc
gtgaaggaggacactgctgatcatcagaaacaaccatggcagcagatccaacaacaccag
cagccattgccccagcatccacaggacggtgatggcatgcttggtgctgtgaatagcgtc
gccggcaattcacgcgacgctaaaaatcacaaacgccacgcgaatatggacgattctgca
ttggtgaaaagcaagcaaccacgcagtaccgtcgattcaagtgctattcgaaagtccaac
ggtaatgataacgctccgccggaagcgaaattttgcgtttga

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