Trichinella spiralis: Tsp_01544
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Entry
Tsp_01544 CDS
T01609
Name
(RefSeq) putative cyclin domain protein
KO
K15188
cyclin T
Organism
tsp
Trichinella spiralis
Pathway
tsp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
Tsp_01544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsp03021
]
Tsp_01544
Transcription machinery [BR:
tsp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
Tsp_01544
Brd4/P-TEFb complex
Tsp_01544
7SK RNP complex
Tsp_01544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
TFIIB
TraI_2_C
Motif
Other DBs
NCBI-GeneID:
10911591
NCBI-ProteinID:
XP_003377342
UniProt:
E5SCT5
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MESLGQSQESSRWLFSDERLAKCPSILAGYDQAKELAYRQQAANHIAEMGSKLSLSQLSL
NTAIVYMHRFYVFHSFQRFPRFDVAAAALFLSAKVEECPRKLEYVVKVSYALQYRDAPSL
ETNSPRYAEEAQKIITFENILLQTLGSINFMLSSLLGFDINVVHPHAHVVRCCQLIKAPK
DLAHSAYFFATDSLHWSTFCLRYRPAVVACICIHLACSWAKWEIPPSKEGKPWYEYVDPN
ITMDTLQELAHEFAGIRERLPDKYRLRRFVRREGQVVAVQGGEAGSETPGMANSTEFAQR
SVEAENVNLSASISSGHVSTTAGPCHNQPVLQSEQQEEQVGRGDANHLADPVTNNDDDGA
TTNLESKSSHHASQPHSVIDLKLYKERREREREANPTSGLDNAESKAQRKSFIPYLTNAA
KDQQSSGAAEIKPSYTSTSTVKEDTADHQKQPWQQIQQHQQPLPQHPQDGDGMLGAVNSV
AGNSRDAKNHKRHANMDDSALVKSKQPRSTVDSSAIRKSNGNDNAPPEAKFCV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaatctcttggacaatcgcaagaaagttcccggtggctgttttccgatgagagactt
gcgaaatgtcctagtattcttgcgggttatgatcaagcgaaggagctagcatatcggcag
caagctgctaatcatattgctgaaatgggttccaaattaagcttgagtcagttgtctttg
aatacggctattgtttatatgcatcgcttttacgtgtttcattcatttcaacggttccca
agatttgatgttgctgctgctgcgcttttcttgtctgcaaaagttgaggaatgtccccga
aaactagaatatgtggtaaaggtatcatatgccttgcaatatcgtgatgctccttcatta
gagaccaattcacctagatatgcagaagaggctcaaaaaattatcacttttgagaatatt
cttctgcaaacgttaggtagtataaattttatgctttcgtcgcttttagggtttgatata
aatgtggttcaccctcacgcgcatgtagtacgatgttgtcagttgatcaaagctcccaaa
gatttagcacacagtgcttatttttttgctactgacagcttacactggtcgaccttttgc
ctacgttatcgccctgctgtggttgcttgcatctgtatacatttggcgtgcagctgggca
aaatgggagattcctccatcgaaagaaggcaagccgtggtacgagtatgtggatccaaat
ataacgatggacactttacaagagcttgcacatgaatttgccggtattcgtgagaggcta
cctgacaaataccggcttcgtcggtttgttcgtcgtgaaggtcaggtagttgcggtgcag
ggtggtgaagctggctcagaaacacccggaatggccaattccacggaatttgctcaaagg
tccgtggaagcggaaaatgtgaatttgagcgccagcatctcatccgggcacgtgtcaact
accgccgggccgtgtcataaccagcctgtattgcagagtgagcagcaggaagagcaggtt
gggagaggtgatgcgaatcacctcgctgatccggtgacgaacaacgacgacgatggggct
acgacaaatttggaaagcaaaagtagccaccacgcttcccagccacacagcgttatcgac
ttgaaattgtacaaggaaaggcgggagcgtgaacgtgaagcgaatccaacctctgggttg
gacaatgcagaatcgaaagctcagcggaagagctttattccatatttgacgaacgctgcc
aaagatcagcagtcttccggtgcagctgaaattaaaccatcctatacgagcacaagcacc
gtgaaggaggacactgctgatcatcagaaacaaccatggcagcagatccaacaacaccag
cagccattgccccagcatccacaggacggtgatggcatgcttggtgctgtgaatagcgtc
gccggcaattcacgcgacgctaaaaatcacaaacgccacgcgaatatggacgattctgca
ttggtgaaaagcaagcaaccacgcagtaccgtcgattcaagtgctattcgaaagtccaac
ggtaatgataacgctccgccggaagcgaaattttgcgtttga
DBGET
integrated database retrieval system