Trichinella spiralis: Tsp_01605
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Entry
Tsp_01605 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K20308
trafficking protein particle complex subunit 11
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01605
Membrane trafficking [BR:
tsp04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
Tsp_01605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun
Gryzun-like
Motif
Other DBs
NCBI-GeneID:
10911649
NCBI-ProteinID:
XP_003377397
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MAVLLADCFFSVQHFFHGMDISELPPELSCPTLQLIVLLGLDVRNNLAHKNIWEALIMNR
RPDRPPLNFQLVSGDSHDLTTMRTKEPSQEAAVKGILKIDWMAKHLHRVPAVLVLFVDLD
WNSPFWNEKLSECASKIQSIRHSFYGRNPYLALVLVQSFVTLPTDELATQKAAELCSSCE
LSSKLLFILPQSEHLFGYVVRLEFAFYDLAQNYYQNELKLLKSKKEALSRTVSQRLYVRY
SFKQGFFSELRQDAHSALKYYKQAYQMLLEIEPVDAAVTELKVIGGYLTYKICRLYFKHN
ASSESMSHFQKHIEYFRNKTSKLEAEFEHSAWLSKQYSFFAELFDAAVQSGLTTSSAEHP
GFYYQTAADYMIRRQHEFELSSKDGENETRRVGEAEEQISTATTTVVENGLVIVQRDRFG
RSVRPFVGGSGFVVQRDDAFQKLSPLSEKSPLLARSSGHAVRPAGPAGTSTASVSAGAGA
VAPGKVDLAGRRLPGAGAALRPRPSPTQGIRGAGVGTVERRVRRWGTGASGPTPAQLAGA
QLGSSARAGRRDRQGGVGRRPDGLATAAARFDDNFRAGRGRRHQRRLDRYRRLLFAGRHG
GGRRAHHVPTAAQIRPARAVAVDQSERAIRGRKRPRPILDTGHAGRTAATSPAQHHALAT
SITLHIGQSTSKVYITLMWDVQSVSTVGFCVSNLGRKAAKLPVELPKRIKVLPKPPKLAI
VCDDGFAVLIGEKYLYRVTVENLENAPISKLKVFESANSRCQHGIKFGYNIEQCDGAALS
LELDSLMPNSKASSVFYITMEKTVDNVSMHMQVDPCLLFVITYEVTLNVENMDMSCNCTL
DRTVSFSSIMPFVVESYMCTTMGQRVNELVVKEDVLLWMHVRGVSVPTLICSCTLHLLNS
FFVNRTGNSKYCIAVIDSDTSLSEICSVRPVGATMEPVSIAHATFCWKRWNETSSSEMIS
TSFSLCNVNIVSCPVIVSCVVPSFGVMYRPFVVKYTIENTTEKTVQLEATFESSERFMFS
GMKKLTRLSKLEIILNVLPLIDGFSTLPRLQLLSSSEAVTSSLKQYSQRNVPLTILITPK
DSTVSSSQDSKIALQDAESYCSVQMVCAYGCFVNATCLHAPLN
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgttgctagccgattgtttctttagcgtgcaacacttttttcacggaatggat
atctcagaactgccacccgaattaagttgtcccacgttgcagttgattgttcttctcggt
ttggacgtgcgtaacaatttagctcacaaaaatatttgggaagcgctgataatgaatagg
cgtccggatcgtccacctttaaactttcaattagtcagcggtgattcgcatgatttaaca
acgatgcggacaaaggagcctagccaagaagcagctgtaaaaggaatattgaaaatcgat
tggatggcaaagcatcttcatcgagttcctgccgttcttgtactgtttgtcgatcttgat
tggaatagtccgttttggaatgaaaaactttctgaatgcgcatcaaaaattcagtcaatt
aggcatagcttttatggccgtaatccatatttggctcttgttttagtccagtcattcgtg
acattaccaacagatgagcttgctacgcaaaaagcagctgaactttgttcatcctgtgaa
ttgtcttcaaagttgctgttcattttaccccaaagtgaacatttattcggttacgtggtt
agattagaattcgcattctatgatttagcgcagaattattatcaaaatgagttgaaatta
ttaaagtcgaaaaaagaagctctcagtagaacagtatctcagcgtttgtatgtgcgatat
tcattcaagcaaggtttcttcagtgaacttcgacaagatgcacattctgctttaaagtat
tataaacaagcataccaaatgttgcttgaaatagagcctgttgacgcagccgtcactgaa
ttgaaggttattggcgggtatttaacatacaagatttgtcgattatatttcaagcataac
gcatcttcggaaagcatgtctcactttcaaaagcatattgaatattttcgaaataaaacc
agcaaattggaagcggaatttgagcattccgcttggttatcaaagcaatattcatttttt
gctgaactgttcgacgcagcggtgcagagtggtttgacgacaagttcagcagagcatccg
ggcttttattatcaaacggctgccgattatatgatccgacgtcagcatgagtttgaattg
tcgtctaaagacggagaaaatgaaacgagaagggtaggagaagcggaagagcaaatctca
acagcaacaacaacagtggttgagaacggactggtcattgtccagcgcgatagattcgga
aggtcggttcgaccattcgtcggcggcagtgggtttgttgtgcaacgcgatgacgcattt
caaaaattatccccgctcagtgagaagtcgccactgcttgctcgttcgtctgggcatgca
gtacgtccggcagggccggctggaacaagcactgcaagcgtttctgcaggcgctggggcc
gttgcgccgggcaaggtggacctcgctggtcggcgcttgcctggcgccggcgctgcgctg
cgcccacgccctagcccgacccaaggaatacgtggcgctggtgttggaactgttgaacgt
cgagtacggcgttggggaaccggcgcgtcgggtccaactccagcgcaacttgctggcgct
cagctcgggagcagtgcccgagccggacgaagggaccgacagggcggagtcggacgccgc
cctgatggcctggcaacggctgctgctcgattcgacgacaactttcgtgccggtcgcggc
cggcgacatcaacgccggcttgaccgttaccggcggcttctgttcgccggaaggcatggc
ggtggtcgccgcgcccaccacgttccaactgcggctcaaatccgacctgcccgagccgtt
gcagttgaccaaagtgagcgtgcaattcgtggccggaaacgaccccgcccaatcttggac
actggacacgccggtcgaacagcggccacttctccagcccagcaccacgcacttgcaacg
tccatcacgctgcatattggacagtcgacgtcgaaagtgtacatcactttgatgtgggac
gtgcagtcagtttcaacggttggattttgcgtttccaatttgggccgtaaagcggcgaaa
ttgccagtagaacttccgaaacgtataaaagttcttccaaaaccaccgaagcttgcaata
gtttgtgacgacggttttgccgttctcattggcgagaaatatttgtacagggttactgtt
gaaaatttggaaaacgcacccatatccaagttgaaagttttcgaatcggcaaacagccgc
tgtcagcacggcattaaatttggttacaacattgagcaatgcgacggtgcggctttgtcg
ttggaattggattctctcatgccaaattccaaagctagttcagttttttacataacaatg
gagaaaactgtggacaacgtatcgatgcatatgcaggtcgacccttgtcttctgttcgtg
atcacttacgaggtgacgttgaacgtggaaaacatggatatgtcgtgtaattgcactctg
gatcgcacggtatcattttcttcgattatgccattcgtagtggaaagttatatgtgcact
acgatgggtcagcgtgtgaatgaattggttgtaaaggaagacgttcttctctggatgcat
gtccgaggagtgtccgttcctacattaatatgcagttgcactttgcatttgttaaatagt
ttctttgtaaatagaactggtaatagtaaatattgtattgctgtgattgactcggatact
tcactttctgaaatatgttcggtaagacctgttggtgcgacgatggaaccagtatcaatt
gcccacgctacattctgttggaaaagatggaatgaaacatcttcatcagaaatgatctca
acgtcgttttccttatgcaacgtgaatattgtatcttgtcctgtaatagttagttgtgtc
gttccttcttttggagtgatgtatcgaccgtttgtggtcaaatatacgattgaaaatact
acggaaaaaacagtgcagcttgaagcaacttttgaatcttcggaaaggttcatgttttca
ggaatgaaaaaattaacgcggttgtcgaaattagaaataattctgaacgttctaccactt
attgatgggttttcaacattaccacgccttcaattgttgtccagttctgaagctgttacg
tcaagtttgaaacaatattctcaacgcaatgtacctttgacaatactgataactccaaaa
gattcgacagtatcgtcgtctcaggattcgaaaattgctcttcaagacgctgaaagttat
tgttctgttcaaatggtgtgcgcttacggctgttttgtcaatgcgacttgcctgcacgca
ccattaaactaa
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integrated database retrieval system
