Trichinella spiralis: Tsp_01623
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Entry
Tsp_01623 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K20317
c-Jun-amino-terminal kinase-interacting protein 4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01623
Membrane trafficking [BR:
tsp04131
]
Endosome - Golgi transport
Others
Others
Tsp_01623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JIP_LZII
WD40_2
RH1
Beta-prop_LRRK2
DUF1759
Motif
Other DBs
NCBI-GeneID:
10911806
NCBI-ProteinID:
XP_003377470
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MTNLIKSDSGEMIFGTESSSSTEESRVMSEKVQNMASSIYKEFERMIQQFGEESVKDLMP
LVVSMLEALDLAQLEKEEHEVELELLKEDNEQLVTQYEREKQLRRSTEQRCLEVEDVFEE
ERSGMKEKLESLESIVRMLELKAKNCTDQVARLEDREVESKQEYNKLHDRYTELFRTHMD
YMERTKFLMGSDKFDVSMTSSGVFSMVRICCCSFTVPQVHSHLVGQFHDDNVEGRDLSNY
PRHSERRSSAVDGWSFERTVPADAEFEAEDFCETPTKKTEETESPPASTHNAADSGSDDA
LGVDLTGGLVDPAEFASAGMGREVENLIKENTELLETKNALNVVKNDLIAQLDGMASEQD
ILREEIRSLEMVRAKLNERVRELEQELKESKQSLEELRNRDENRTSDVPMAQRKRFTRIE
MARVLMERNQYKEKLMELQEAVRWTEMIRASRNDPSLKRKRGSIWDFFNGLFSSGSNHAA
ADQHAMVNLRYNAPNRNLLPGSEKQRKSSSNGKLKAFDFLDKDFSSERRAAERKEQYKLV
KAHVKKDESGRFQAYGWSIPVLDAPQASVPVPVSCQPLYENEPHLKIWCACGVDLNGGFT
PDGGFIVGSSVFYSKEHLRDNFCEQPTQQAADEVGKLDYELKVKQMEIQRHQEREWLHSN
LVWICSSARGRSLVSVIRANKANEIIDTFDVSSSHILCVCSISGHKSNAVVVVGGADISD
YLANSSSQPDDCCYTKPKESTAVNDDEQDVHSAEAAANSAVWVDLTMDNEQRMLVRKNPL
PATPAADNSNSGTGSAETVPEVQSSEVASEILISSMYGEEGINSTSSSTSTKKKQEVAKE
EVLVAVSTADDDQGRLGVVFVYIHIKDYAKDAFISEYKERIWKHLPEQVKDGLQKFSDHM
SFATVLPTVWMGSQSGQLYIHSAVSEWRKCLHAIQLDDAILSIASQRARICRTCQWDDGE
WNVDGYYLITIGMPSISVRCLAVVLDKIWCGYRNKIYIIDPKTLVVEVVIVTALHYVVVV
VVHSFNAHPRKESQVRQLCWYGDGVWCSIRLDSSLRLFNAKTYRHIQDVDIEPYVSNMLG
TSKLGFSFVRITSLLISCKRLWIGTGNGVVLSVPLTEQIEKKGGILVQRSDPTAAAAKTK
PGEAIRVYSDGSGNSDQICPGTFVPYCNMVLAQLSFHGHRDAVKFFVAVPEVESSDRATR
TADEASSKDASKPATCDVKTMIVMSGGEGYIDFRVGDDDDLDTTQTGISRRDWSHLIVWE
VKCET
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttgatcaaaagcgacagcggtgagatgatattcggcacggagtccagctct
agcacggaagaatctcgcgtgatgtcggaaaaggtgcagaatatggccagctcaatttac
aaagaatttgaacgcatgatacaacagttcggtgaagagtctgtgaaagatttgatgccg
ttggtggttagcatgttggaagctttggatttggcacagttggaaaaagaagagcacgaa
gtggagttggaacttctgaaagaagacaacgagcagctggtcacgcagtacgaacgggaa
aagcagttgcgaagatcaacagaacaacgatgtcttgaagttgaagatgtattcgaagag
gagagaagtggcatgaaggaaaaattggaatcgctggaatcgatcgtgcgaatgttggag
ctcaaagcaaaaaattgcaccgatcaagtagccagattggaagatcgcgaagtggaatcc
aaacaagagtacaacaaacttcacgatcggtatacggaattatttcgcacccatatggac
tacatggaaaggacaaagtttctcatgggcagtgataaattcgacgttagcatgacaagc
agtggagtgttttccatggtgcgaatttgttgttgtagttttactgttccacaagtacat
tcgcatttagttgggcaatttcacgacgacaacgtggaaggaagagatttgagcaattat
ccgagacattcagagcgtcgatcttcggctgtcgatggatggagtttcgaacgtacagtt
ccagcagatgcggaatttgaagctgaagatttttgcgaaacacctacaaaaaaaactgaa
gaaaccgaaagcccaccggcttcgacccacaacgctgccgattctggatccgacgatgct
ctcggtgtggatttgacaggcggcttggttgatcctgcggaattcgcttcagcgggtatg
gggcgtgaggtggaaaatttgatcaaagagaacacggaactgttggagacgaagaacgcc
ctgaatgtggtcaaaaatgatctgatcgcacaactcgatggtatggcaagtgaacaagat
attctgcgcgaagagatacgcagcttggagatggttcgagcgaaattgaacgaacgtgta
cgggaacttgaacaagaattgaaagaatcgaaacaatcgttggaagagttgcgcaatcgt
gatgagaatcgtactagcgacgtgccgatggctcaacggaaacgattcactcgaattgaa
atggctcgcgtgttgatggaacgcaatcagtacaaggaaaaattgatggaactgcaagag
gcggttcgttggacagaaatgatacgcgcgtcgaggaacgatccgtcgttgaaacgcaaa
cgaggcagcatttgggatttcttcaacggattgttcagcagcggttcgaaccacgctgcc
gctgaccagcatgcgatggtcaatttgcgctacaatgcaccgaatcggaatttgcttcct
ggatcggagaaacagcgcaaaagtagcagcaatggcaaattgaaagcttttgattttcta
gacaaagatttttcatctgaacgacgtgccgcggaaagaaaggaacaatacaagttggtg
aaagcgcacgtgaaaaaggacgaatccggtcgattccaagcttacggctggagtataccg
gtgctcgacgctcctcaagcatccgttccagtgccggtatcttgtcagcctctttatgaa
aacgagccacacttgaagatctggtgcgcttgtggtgttgacttgaacggcggttttacc
ccagatggcggctttattgtcgggagcagtgtattttattccaaagaacatttgcgagat
aatttctgcgagcagccaactcaacaagctgcagacgaagtgggaaaacttgactatgaa
ctcaaggtgaaacagatggaaattcaacgacatcaagaacgagagtggttgcattcgaat
ttggtttggatatgcagctcggccaggggccgcagcttggtttcggtgatccgtgctaac
aaagccaacgaaattatcgataccttcgatgtgtcctcgtcgcacatcctctgcgtatgc
agcatttctggtcacaagagcaatgcagttgttgttgttggtggagccgacatcagcgac
tatttggccaactcatcatcccaacctgacgactgctgctacaccaagcccaaagagtcg
actgctgtgaacgacgacgaacaagatgtgcacagtgcagaagcagcagctaattcggcg
gtttgggttgatttgacgatggacaatgagcagcgtatgcttgtgcgaaaaaatccattg
cctgcaacaccagcagctgacaattccaattctggcaccggatccgctgaaacagtacca
gaagtgcagagttcagaagtggcatcggaaattttgatcagcagcatgtacggcgaagag
ggtatcaattccacctcttcttctactagcactaagaaaaagcaagaggtagctaaggag
gaggtacttgttgctgtttcaactgccgacgacgaccaaggtaggctaggtgtggtgttt
gtatacatacacatcaaagattatgcaaaggatgctttcatttcagagtacaaagaacgt
atttggaaacatttgccagaacaagttaaggacggattgcaaaaattttccgaccacatg
tcatttgcgacggtactgcctactgtatggatgggttcccaaagtggacaattgtacatt
cattccgcagtgtcggaatggcgtaaatgtttgcacgcgatacagttggacgatgccatc
cttagtatagcatcacaaagggcgcgcatttgtcgcacttgccaatgggacgatggtgaa
tggaatgtggatggatattatttgataacaattggaatgccttcaatttcggtccggtgt
ttggcggttgtgttggacaaaatttggtgtggttacaggaataaaatttacataatcgat
ccgaaaacgttggttgttgaggttgttattgtcactgcattgcattatgttgttgttgtt
gttgttcattcgttcaatgctcatccacgcaaagagagccaagtacgccagttgtgctgg
tacggggacggggtgtggtgttcaattcgcctcgattcgtcgttgcgtcttttcaacgcc
aaaacctaccgccacatacaagacgtcgacattgagccttacgtgagcaacatgctggga
acgagcaagctgggcttttcgtttgtgcgcatcacttcgttgctcatctcttgcaagcga
ctgtggatcggcactggcaacggcgttgtcctttccgtaccgttgactgaacaaattgaa
aaaaaaggtggtattcttgttcaacgttccgacccgacagcagcagcagccaaaaccaag
ccgggcgaagcgattcgtgtctacagtgatggttctggtaacagtgatcaaatttgcccg
ggaacttttgtcccttactgtaacatggtacttgcccaactgtctttccacggtcacagg
gatgctgtgaaatttttcgtcgccgttcctgaagtggaaagttcggacagggcgacgaga
actgccgatgaagcttcttcaaaggatgcttcaaagccggcaacgtgcgacgtgaaaacg
atgatagtgatgtctggtggagaagggtacatcgattttcgagtcggtgatgatgacgat
ttggacacaacacagactggcataagtcgacgagattggtctcatttgattgtatgggaa
gtgaagtgtgaaacgtga
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