Trichinella spiralis: Tsp_01653
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Entry
Tsp_01653 CDS
T01609
Name
(RefSeq) DNA repair protein RAD51
KO
K10870
RAD51-like protein 2
Organism
tsp
Trichinella spiralis
Pathway
tsp03440
Homologous recombination
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Tsp_01653
03460 Fanconi anemia pathway
Tsp_01653
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_01653
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
Tsp_01653
FA (Fanconi anemia) pathway
Other FA pathway factors
Tsp_01653
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
ATPase
DUF4487
AAA_24
Motif
Other DBs
NCBI-GeneID:
10911776
NCBI-ProteinID:
XP_003377441
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
METKNKKHTAKNSSITFSCKESGLSICKSPEICADLGSPSILNELIDQMKFKKKNESKPP
LCADCDFLMLCLLYEIITKYLSMECERRLFAQTAKTLLDRDVEDVQSIVTFCESLDNALG
GGIQLGQMTECAGPSGIGKTQLCLQLAVDVCIPKVLGGVDGEVIYIDTEGAFKYKRLNQI
AEAAVSHCRRVAETEEQQIAANGFTLSKILSRVHYQRCVDLPTLQRCLKSLLCFIRLHSQ
IFLVNQITTRFGEDGEPFSVPSVGPLLTSNCAQQLLLFHRQGNLRYARLMKSSTRPPCGA
VYTVTRNVVIVVVVVVGRRRMRRRGLGRSRRLVDDGSLGVDRVSQIWKRGVQLVARAVQQ
RRYSVEKAGGVHDQKHVLHRLGHRFDEVVVLQFQVAFHEIQNVQPQVDERVERRQRHQVL
QKHLAGHGQRPYACLVHAATTTTSDSSVVVVVFVVVMMVRCWRGASGRIRNRLLVGVQQC
AQQWKQHPVEATFPILAGDLLQFWNQHRPLQKCHGRRADNSAPVAAQPSQCLEQRLPTSR
PQRRRGRVEQRRRHFDENQISQIQQLQRQLQVSGSQITTVEQCLLLVFTVHL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaagaacaaaaagcatacagccaagaattcatccatcaccttttcgtgcaaa
gaaagcggattgtctatttgcaagtctccggaaatttgcgcggatctaggatcgccgagt
atcttaaacgagctaattgatcaaatgaagttcaaaaagaaaaacgaaagcaaaccacct
ctttgtgcagactgtgattttctgatgctttgtttattatatgaaataatcacaaaatat
ttgagcatggaatgcgaacgtcgactattcgcgcagactgcgaaaacgttgctggatcgt
gatgtagaagatgttcagtcgattgttactttttgtgaaagtctcgacaatgcattgggt
ggaggcatacagttgggacagatgacagaatgtgcaggaccgtctggaattggtaaaacg
caactttgtttacaacttgccgtagatgtttgtattccaaaagttctgggcggtgtagat
ggtgaagttatttacatagatacagagggagctttcaaatacaagcgtttgaaccaaatt
gctgaagccgcggtatctcattgcagaagagttgcagaaacagaagaacaacaaattgct
gcaaatggattcaccttgagcaaaattctgtcccgagtgcattatcaacgttgcgttgat
ttaccaacgcttcagcgttgcttgaaatctctgctttgtttcatccgactgcacagtcaa
atatttctggtcaatcaaataacgaccagattcggcgaagacggtgaaccgttcagtgta
ccgtcggttggaccacttttgactagcaactgcgcccaacaactgttgcttttccaccgg
caaggcaatctgcgctacgccagactgatgaaatcatccacccgtccgccctgcggtgcc
gtatacactgttacaagaaatgtcgtcatcgttgttgttgttgttgttggccgtcgccga
atgcgccggcgcgggctgggccgcagccgtcgcctggtcgacgacggaagtttgggtgtc
gatcgcgtgagccaaatctggaaaagaggcgttcaacttgtggcgcgtgcggtccaacag
cgaaggtacagtgtcgaaaaggccggcggtgtgcatgaccagaagcatgttcttcaccga
ctcgggcaccgattcgacgaggtcgttgttctccaattccaagtagcgttccatgaaatc
caaaatgtccaaccacaggtcgacgaaagagtcgagcgtcgacaacggcatcaagtgctg
caaaaacaccttgctggtcatggtcaacgcccgtacgcgtgtctcgtccatgccgccacc
accaccaccagcgacagcagcgtcgtcgttgtcgtcttcgttgtggtgatgatggtgcgt
tgttggcgtggtgccagtggacggattcgaaatcgactgctggtcggcgttcaacagtgc
gctcagcagtggaaacagcacccagtagaagcaactttcccaatcctggccggtgatttg
cttcaattctggaaccaacatcgcccgttgcaaaaatgtcatggccgtcgtgcggacaac
tctgcgcctgtcgcagcacagcctagccagtgcttggagcaacggctgccaacatcgcgt
ccacaacgtcgccgtgggcgtgtcgaacagcggcgtcgccactttgacgaaaatcaaata
agtcaaatccaacagctgcaacgacagttgcaagtaagtggaagccaaatcacaaccgtc
gagcagtgtcttcttcttgtcttcaccgttcacttgtga
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