Trichinella spiralis: Tsp_01654
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Entry
Tsp_01654 CDS
T01609
Name
(RefSeq) putative Sec7 domain protein
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_01654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01654
Membrane trafficking [BR:
tsp04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
Tsp_01654
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
DCB
RCC_reductase
Motif
Other DBs
NCBI-GeneID:
10911775
NCBI-ProteinID:
XP_003377440
LinkDB
All DBs
Position
Unknown
AA seq
1248 aa
AA seq
DB search
MSRNTLYIVQSELNAVVATLRRSQRLLGGVPQGQDPLLRSFFDLREVLSSVPSLADVAPS
VFVAPFLDVIRSDHTGGTATEQALVSVDKFLSYGLFDPACITAASAVQQIAEAVTRARFV
GTDPSFDEVVILRILQVLRALLLSPAGALLTDETVCEMLQSCFRICFEEGLSQLLRKAAE
SCLKDMVQLIFKRLADFREDPRHPYVRRLQTRASSRDETFSSRRRLKRRRKHFAAVVSSE
PSSLAAVEQAEHCPLGLDVLADAAPGGSGSPPASAGSSDQSGLQADGVVENSNTGNQPEI
AVPAKLGPETLGTDDAGAAETVDPSPSTGPYGLPCSRELFRFLIALCNPWEQQQNDQMIE
LGLNLLTVALEVGVDQLSKFSLMLPLVQNDLCRHLISLLQATKVSLLSSALRVGFLLFES
LRCHLKLQLEMYLCKLMELATAAEVLPTPTSATAQSGPSISSRTSTLSNTVRLELRELAL
EALVQLWRVPGLITELYLNYDCDLYCSDLFEELTKLLSKNAFPVTGLTNAHILSLDALLT
VVDTIELNCHLRMINYRRHSSSSSDTGGGDATAAATAAATPCSFDGQWCQTAAPSPGSRS
STAYALPAVCGYSVGFAVSSCSLSTTTGQQRSDDDVKLENETAPNPELLLCAVAAHETEI
PSHEELLRLKMKKRILTNASDLFNQNPSKGIEFLQENGLLSMPYSPNEVVRWLRENPRLN
KRKIAEFIVNRKNRPVLDAFVKSFDFRKLRIDESLREFLESFRLPGEAAEISTIIEYYAD
HWHKSNGTPFASTDAAFTLAYAVIMLNVDQHNPQAKRQQQPMSLEQFVKNLNGVNGGDNF
DRTMLEKIYQAVRTEEIVMPEEQGGLLPVDAGAQRRRRRPTLRHACRKCQSPGGRQGVVR
PGARPRRHFARRLAQRVRLPVELLPRRTVAAWPDRLRRFRRQSRLRQHQQTVAQSPEARL
VGVGPAQLALLVFGRLGVGRRLARRRRPRRPAAQRVATARRRSARRLSRRPDARRLEILV
LAGVVRTDQSVAARQRRGAAGRRRRWPASTQRRRRTVVGLFDRNDGQRGRSQPRPHRPLL
AHFARPLVQPDRRPRRPALPRRTGRRRLASAGQSPTAEARRRRPSARRAAGARRGQPGDG
AVDRQTTRPRPAPIAASERRLRSSGAPLGPAVRSARAGRRRRFRRPARFDRRRSRPKLRS
APAPSIQHRSRTAEATTTTIRSRLHVRFGIVHRRHQHRFAEIARRQCG
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaaacactctttatattgttcaaagtgaattgaacgcggtggtggcaactctg
cgccgaagtcaaagactgcttggtggtgttcctcagggccaggatccattgttgagaagt
ttttttgatttgcgagaagtgctcagctcggttccgagtcttgccgacgtagcacccagt
gttttcgttgcaccgtttttggatgtcattcgctctgatcacactggtggcacggctacc
gaacaggcactagtgtcggttgacaaatttttatcgtacggtttatttgatccagcttgc
attacggccgccagtgctgttcaacaaattgcagaagcagtaaccagagctcgctttgtc
ggtactgatccaagttttgatgaagttgtcattcttcgaattttgcaggtattgcgtgcg
ttgcttttgtctccagccggtgctctgctgacagacgagacagtatgtgaaatgttgcag
tcatgtttccgtatttgtttcgaagagggtttgagtcagttgcttcgcaaagcggccgaa
tcttgtctgaaagatatggttcagttgattttcaaacgactggccgattttcgcgaagat
ccgcgacatccgtacgtgcggcggttgcaaacccgagcttcatccagggatgagacgttt
tccagtcgtcgcaggctgaagcgacgtcgcaaacacttcgccgccgtcgtgtcgagcgaa
ccttcttcgttggcggccgtcgaacaagccgaacattgtccgcttggtttggatgtgttg
gcggatgctgctcccggaggctccggatcgcctccggcttcggctggatcaagtgaccag
tcgggattgcaagccgacggcgtggttgagaacagcaacaccggaaatcagccagaaatt
gcggttccggcgaaacttggcccggagacgcttggaactgacgacgccggtgctgccgag
acggtcgatccgtcaccgtcgactggaccctacggattgccttgtagtcgggagttgttc
cgttttttgatcgcgttgtgcaatccatgggaacagcagcagaacgaccagatgatcgaa
cttggcctgaatttgttgaccgttgcgttggaagtgggcgtggaccagctgtctaaattt
tcgctcatgttgccgctcgtgcagaacgacctgtgccgacatttgatcagcttgctccag
gcgaccaaagtgtctctgttgtcgtcggcgttgcgggtcggctttttgcttttcgaatct
ttgcgctgccatttgaagttgcagctggaaatgtacctttgcaagttgatggaactggcg
accgcggccgaagtgttgcccacgccgacctcggccacggcccagtccggtccgtcaatt
tccagtcgaacgtctactctcagcaatacggtacgtctggagttgcgagagttggccttg
gaagcgttggtgcagctgtggcgcgtgcctggcttgatcacggaactttatttgaattat
gactgcgatttgtactgttcggatttgttcgaagagttgacgaaattgttgtcgaaaaat
gcatttccagtcaccggcttgaccaacgcccacatcctgagcttggacgcgttgttgacc
gtggtcgacacgatcgaactcaactgtcatctgcggatgatcaactaccgacgccactcg
tcgtcttcgtccgacaccggcggcggtgacgcgacggcagccgccaccgcagcagcgaca
ccgtgctcgttcgacggccagtggtgccagacggcggcgccttcgcccggctctcgttct
tcgacagcgtacgcactgccggctgtctgcggctatagcgtcggctttgccgtctcgtcc
tgctcgttgtccacaacgaccggtcagcaacggtcggacgacgatgtgaaattggaaaac
gaaacggcgcccaaccccgagctgttgttatgtgcagttgcggcccacgagaccgaaata
ccgtcccacgaggagttgttacgtttgaagatgaagaagcggattttgaccaacgccagc
gatctgttcaaccagaatccgtcgaaagggatcgaatttctccaagagaacggcctgctc
agcatgccgtactcgccgaacgaggtggtgcgctggttgcgcgaaaatccgcgcttgaac
aagaggaaaattgccgaatttattgtcaaccgaaaaaatcgtccagttctcgatgcgttt
gtgaaatcgttcgattttcgaaaattgcgcatcgacgaaagtttgcgcgaatttttggaa
agcttccgattgcccggcgaagcggccgaaatttcgaccataatcgaatattacgccgac
cactggcacaagtcgaacgggacgccgttcgccagcaccgacgccgccttcacgctcgcc
tacgcggtcatcatgctcaacgtggaccagcacaacccgcaggcgaaacgccaacaacag
ccgatgtcgttggaacagtttgtgaaaaatctgaacggcgtcaacggcggcgacaatttc
gaccggaccatgttggaaaaaatctaccaggccgtccggaccgaagagatcgtcatgccc
gaagaacagggcggtctgctgcctgttgacgccggcgcgcaacgccgacggcgccgacca
actctgcgccacgcttgccgaaagtgccaaagcccaggcggccgccagggcgttgttcga
cctggtgcacgcccacggcgacattttgcgcgaaggctggcgcagcgtgttcgactgcct
gttgaactgctaccacgccgaactgttgccgcttggcctgaccgactgcgaagatttcgc
cgacagtcgcggctacgtcaacatcagcagaccgttgcccagagcccagaagcaagactc
gtcggcgtcgggcctgctcagctcgctctactcgtatttgggcggctcggcgtcgggcgg
cgactcgcgcgacgccgacgcccacggcgcccggcagcgcaacgagtggcgacagcgcgg
cgccgctctgctcgtcgactgtcgcgtcgaccagacgctcgtcgactcgaaatacttgtc
ctcgcaggcgttgtccgaactgatcaaagcgttgctgctcgccagcgccgcggtgctgcc
ggacgacggcgccgttggccggcgtcgactcagcgacgtcgacgaacggtcgttggtctt
tttgaccgaaacgatggtcagcgtggccgttcacaaccgcgaccgcatcgcccccttctg
gcgcactttgcacgcccacttgttcagcctgatcgccgaccacgccgaccggcgcttcct
cgtcgaacgggccgtcgtcggctggcttcggctggccaatcgcctactgccgaggcaaga
cgtcggcgaccaagtgctcgacgcgctgccggcgctcggcgcggccagccaggcgacggt
gccgtcgatcgccagacaactcgcccacggcctgcaccaattgctgcgagcgaacgccgc
ctacgttcgtctggcgcgccactgggaccagctgttcgctctgctcgagctggtcggcgc
cggcgctttcgtcggccagctcgattcgaccggcgacgttcgagaccaaagcttcgatca
gcaccggcaccaagcattcaacaccgttcgagaacagccgaagcaacaacaacaacaata
cgatcgcggctacacgtccgattcggaattgtacaccgccgccaccagcaccggttcgcg
gaaattgcccgtcggcagtgtgggtga
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integrated database retrieval system
