Trichinella spiralis: Tsp_01729 Help Entry Tsp_01729         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K14311   nuclear pore complex protein Nup188 Organism tsp  Trichinella spiralis Pathway tsp03013   Nucleocytoplasmic transport Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     Tsp_01729  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tsp03019]     Tsp_01729 Messenger RNA biogenesis [BR:tsp03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Nuclear pore complex      Tsp_01729 BRITE hierarchy SSDB OrthologParalogGFIT Other DBs NCBI-GeneID:  10911963 NCBI-ProteinID:  XP_003377543 LinkDB All DBs Position Unknown AA seq 1543 aa AA seqDB search MTEIEIRSTQHFWSVLVSLEPVKEEVFSMLLGQHDALFRRGFDFYKQRAANVDSDLESLR SISVSSTVIDFVDEASRLLDLDFMQTYEMFSSFLVYDYTGERRDMDDLLTENECRRSFLC DLTCFYNRQLSYLAKCLVEVVRCIVSDQSPYHSVLERYAVRYVGEESFIDGMIREYERVV QFSPPDDLLNGIYVEQHLILQCELVNLIVWVYHIFSVNSGQVLSTAQMLRGAWKLSTRFD KEPNIRERICAVDALENFLMVKLCDIELLSLNFNAVVTSLCPCSKHSCVHMLWALNRELC RLIGEREQWRCGDVPRSRADYQHFSVIAHKYDSLQSCVAMLDNMESCVEVETVDLCRATL YLVLNQCLDLFVPTSLGAVDTLEQLVERLLRCDSVVDQIWATNFSTGISEFVRDTLYLFP YRFWPTIAFLISISTASASNASRAFNLFRRLPSCSEAIATVNLDHVAAVQADGEQTLYEL KQVHYLNGESGICVPPGTMGTVNNCDYIQWKLFYNGWQFLLTDLNWQMNRTPGELLLRRV AVFRLVRQLVKLGPDVTLQLGHFFDWALGWTADCCKTQPTRGDVLLLAEIIGCFADASAT FPAQVLQRLVDHNILCPSFTTTDTDIRSAWDRILAEGVINKEYSEFTLGYVQLCWNVIDS DESSIHQRTVYHLICTIVQVVFPLYGHWSTLRSAKSRQIVCICLSIVEKCLASTSGDGLW RRCRFDCLHWLLEVSRVREALLDLVSIGEPTFSRLCQRLATKTAVNSAVQLLSAGLRVCA AVADSELSTDQRVGSRFWRELFFGSNRRPATLLTVGQLLFTRFGGTIPVLAITLLREAAW KFPLALVSTFGAFAGAFGDAFVLRLLCATELAQMRLQCWRFLATALETQYAVVEELVGVE SDQQHALAGALVEALAAPTATEMSRAAMTVVKALWRQDCASMIDCLKNVDHFWEAFSKPL TVAEQQFAPVVVADAFVVLCCEIGAIPTKPPPAAIRRIVETLVESDRIELTTKTLNRLCL SEADFYAKLESLAAFRDFIQVTFNFAHLSTLWTLASSTHVLEAGIELVVGLMGKPRAGVD ELKLVKIMAECLLLILMRCRLTVLSKCLLRLFTVIGELDSSTVMSIGGSLAPVAIVLLDH FEQAADVGGLLSEEELMINVTVNFLKSFQSLWSVTKPKTDHVLLLFSSILLRLLDRLPAY VNRCGSDFFTNYVDYVERIRPAASVQLIQATLNFFSKMLHINSEETLAMLSTSCFERLVY LEPARLLFPVEAVQFGDRVGGGIFPRPSPSVRIDLFVPARSVRIEMPHPSSGIALLFVHG DAAPKMAGRHSDRLLGFDAPRHLQRHHHPALLFVSSGRAGQTGQFGQPVGHEPSQTTVGR IVVLRVANFAPIQSAGRPSRPNRGSAAVGDRLARVRTAAGGRLRQHGGAPTRRPLPPVVR SVVVRRRTVRLDAAFPESPTGSCHRTDSTAARDDGGAAGVGHFPGLFVLFTADDLEIPSR PGARRSSPRTQPRCPTVRRRSHVVAISPLLANCRGGFEQCVCV NT seq 4632 nt NT seq  +upstreamnt  +downstreamnt atgacagagatagaaattcgttccacgcagcacttctggtcggtactggtgtctttggaa ccggtgaaagaggaagtgttcagcatgctgttgggccagcacgacgcgctttttcgacgc ggtttcgacttttacaagcagcgtgccgcgaacgtcgactcggatcttgaatcgctgcgt tccatatcggtcagttcgaccgtcattgactttgtcgacgaagcatctcgccttctggat ctcgactttatgcaaacgtacgagatgttctcttcgttcttggtttacgattataccggt gaacggcgtgatatggacgatttgttgacggaaaatgaatgtcgacggtcgtttttgtgc gatttgacttgcttttacaatcgacaattgtcttatttggcaaaatgcctggttgaagtt gtacgctgcatcgtcagcgaccagtcgccctatcactctgtactggaacgttacgccgta cggtacgtcggtgaggagagtttcatcgacgggatgatacgtgaatacgagcgtgtggtt caattttcgccgcccgacgatctgttgaatggaatttacgtggaacagcatttgattctc caatgcgagttggtaaatttgatcgtttgggtttatcacatattttcggtcaacagtggt caagtgttgtcgacggcgcagatgcttcgcggtgcttggaaattgtcgacacgtttcgac aaagagccgaacatccgcgaacggatttgtgcagtggacgcgttggaaaattttctcatg gtcaaactttgtgatatcgaattgttgtcgttgaatttcaacgcagtggtcacttcgctt tgtccatgttcgaagcacagttgcgtccacatgctgtgggcgttgaaccgggagttgtgc cgtctgatcggcgaacgagaacagtggcgctgtggtgacgtgccgcggtcacgggccgac taccagcacttcagcgtgatcgcccacaaatacgattctctgcagtcgtgcgtcgccatg ctcgacaacatggaaagttgcgtcgaagtggaaacggtggatttgtgccgcgccacgctg tatctggtgttgaaccagtgcctggatctgttcgtaccgacatcgttgggcgcggtcgac acgctcgaacagctcgtcgaacgactgctccgttgcgacagcgttgtcgaccaaatttgg gcgaccaatttttcgaccggcatcagcgaattcgtccgcgacactttgtacttgttcccc taccgtttctggccgacgatcgcttttctcatttccatatcgaccgccagcgcttcaaac gcttccagagcgttcaatttatttcgtcgactgcccagttgcagcgaagcgatcgccacg gtcaatttggaccacgtcgccgccgtccaagccgacggcgagcaaacactctacgaactg aagcaggtccactatttgaacggcgagtccggcatttgcgtcccgccgggcaccatgggc accgtcaacaactgcgactacatccagtggaagttattttacaacggttggcaatttctg ctgaccgatttgaactggcagatgaatcgcactccgggcgaattgctgttgcgccgcgtg gccgtgttccgtttggttcgtcaactggtcaaattgggtccggatgtcactttgcagttg ggtcattttttcgactgggccctcggctggacagccgactgttgcaaaacgcaacccact cggggcgacgtgctgctgttggccgaaataatcggctgctttgccgacgcgagtgccacg tttccggcccaagttttgcaacgactcgtggaccacaacattctctgtccgtcgttcacg acaaccgacaccgacatccggtccgcttgggatcggatactggccgaaggggtcattaac aaagagtattccgaattcacactcggctacgtccaattgtgctggaacgtgatcgacagc gacgaatcttcgatacaccagcgtacagtgtaccatttgatttgcaccatcgtgcaggtc gtttttccgctctacggacattggtcgacgttgcggtcggcgaaaagtcgtcaaatcgtc tgcatctgcttgtcgatagtggaaaaatgcctggcttcgaccagcggcgacggtctgtgg cgacgttgccgattcgactgtctgcactggttgttggaagtgagccgcgtacgcgaggcg ctgttggatctggtgtcgatcggcgaaccgacgttcagtcgactctgccaacgactggcc acgaaaacggccgtcaattcggccgtccaactgttgtcggctggattgcgcgtttgcgca gcggtcgccgacagcgaactgtccaccgaccaacgggtgggtagtagattttggcgcgaa ttgtttttcggttccaatcgacgtccggcaactctgctgaccgttggtcagttgttgttt actcgattcggcggtacgataccggttttggcgatcacgttgttgcgcgaggcggcttgg aaatttccactggctttggtcagtacgttcggcgcttttgccggtgctttcggcgacgcg ttcgttttgcgcctgctctgcgcgaccgaactggcccagatgcgactccagtgttggcgt tttttggccacagctttggaaactcaatatgctgtggtcgaagagttggtcggcgtcgaa tcggaccaacagcatgctctggccggggcgttggtcgaagctttggcagctccgaccgcg accgaaatgagcagggcggccatgacggtcgtcaaagctctgtggcgtcaagactgtgcg tcgatgatcgactgtttgaaaaatgtcgaccatttttgggaagcattttccaagccgttg acagtggccgaacaacaattcgctccggtagtcgttgccgacgcattcgtagtactctgc tgtgaaattggcgccattccaaccaaaccaccgccggcggctatcagacggatagtcgaa actttggtcgaatcggatcgaatcgaattgaccacgaaaacgttgaatcgactctgtttg agcgaagcggacttttacgccaagctcgaatcgttggccgcgtttcgagatttcatccaa gtcacgttcaattttgcccacttgtccacattgtggacactggcctcttcgacccacgta ctcgaagctggaattgaattggtggtcggtttgatgggaaaaccgcgtgccggtgtcgac gaattgaaattggtcaaaattatggccgaatgtctgttgctgatactgatgcgttgccgt ctgacagtattatcgaaatgtttgttgcgattgttcacggtaatcggtgaattggattcg agcacggtgatgtcgatcggcggctcgttggcgccagtggcgattgttctgctcgaccat ttcgaacaagcggccgacgtgggcggtcttttgtccgaagaagaattgatgatcaacgtg acggtgaattttttgaaatcgtttcaatcgctctggtcggtgacgaagccgaaaaccgac cacgtcctattgttgttcagttcgattctgttgcgtctgctcgaccgtttgccggcctac gtcaaccggtgcggtagtgattttttcaccaactacgtcgactacgtggaacggatccga ccggctgccagtgtccaacttattcaggcgacgttgaattttttttccaaaatgctccac atcaacagcgaagagacgttggcaatgttgagcacgagttgcttcgaacgactcgtctat ttggaaccggcgcggttgttgttcccggtcgaagcggtgcaattcggtgatcgtgtcggc ggtggaatttttccgcgcccgtctccaagtgttcgaatcgatctgttcgtcccagctcga agcgttcgaatcgaaatgccacacccttcgtctggtattgcgctactttttgtccatggc gacgcagcgccgaaaatggccggtcgacattcggaccgtctgctcggattcgatgcgccg cgccacctgcagcgtcaccatcaccctgctctattatttgtgtcgtcaggacgcgctggc cagactggtcaattcggacaaccagtcggacacgaaccaagccagacgactgttggtcga attgttgttttacgcgttgcaaattttgctccaattcagtccgccggtcgaccgtctcgc ccgaaccgcgggtctgctgcggtcggcgatcgactcgcacgcgttcgaaccgctgctggc ggtcgacttcggcagcacggtggcgccccaactcggcgaccactgccgcctgtcgttcgg tctgttgttgtccggcgccgaacagttcgcctcgacgctgcgttcccagaatcgccaacc ggaagttgtcaccgaaccgattccactgctgcgcgagacgatggaggcgctgctggcgtt ggtcacttcccaggcctgtttgtactgttcactgccgacgatctcgaaataccaagccga ccaggtgcgcgacgaagttcaccacgaactcaaccacgttgtccaactgtgcggcgtcga tcccacgtcgttgccatttctccactacttgcaaactgtcgtggcggttttgaacaatgt gtgtgtgtgtga

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