Trichinella spiralis: Tsp_01929a
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Entry
Tsp_01929a CDS
T01609
Name
(RefSeq) vacuolar protein sorting-associated protein 53-like protein
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01929a
Membrane trafficking [BR:
tsp04131
]
Protein recycling
Others
EARP complex
Tsp_01929a
Endosome - Golgi transport
Tethering complex
GARP complex
Tsp_01929a
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
PRORP
COX6B
COG4_N
NBD94
Motif
Other DBs
NCBI-GeneID:
10907134
NCBI-ProteinID:
XP_003377731
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MAVFMFSLFLCFDKIAFTNSSDVTKDKCPYNTFIKLLEQCRILSNWRLNDHQVKRRSSFM
SKASDVPLLDERRKCWTARDQFFACLDANKDDEKLCKSLKDVFEASCRRTWRRRMFVLAL
RRLVVDLRWFRRFEIEKQFTGRLLKFCSTSTDMDQVLRTDSKSKALYQTIHSYIVHNDIV
SNDDWYCFRTMLLESSDKQNTVDCAVFRVLEENCYFELGVSYISYLFDTGLDNPVTIKQA
VHLLEQCFLKDFEHFHSGVAIQLLEHILVMEKSFPNFFTYQKAIVLCMCGHFHQCLSMWS
SVLDCPTKRRLISTLFIAACRYSNVDSIWSMRMKSPYTLSASCHMEMSKYLKEQLQQNGE
WRSLRELAHYVIFYGEKIKWSVDCGIVTDSGCCSCCSSPLKQLTLSDEDFNSMKDELVKR
IVIGDSVYRQTSPEEYYRFRQTNDDAFVIVAAVSSGKHCYMVSNDQLNTHCHKLNPPQRD
YFLLWRRMRQILSEQAEPNAPRHRTLQRTEIEKRMMSGDSEEQKPKWLRVMDLQTPVRFS
ETVQSALDSVADPEDPFNKPDFCAISYINHLFPSEPSLAHVGQVMADVQRQIDQVDQEIS
DILEKQSVAQLDSEALLEQTKQAMRELFGRIMDIKRQTDMSETTVKEITRDIRQLDLAKK
NLTASITTLNHLHMLVS
NT seq
2032 nt
NT seq
+upstream
nt +downstream
nt
atggccgtattcatgttcagtctgttcctttgctttgataaaatcgcatttaccaattca
tctgatgtgacgaaagacaaatgcccatacaacacatttatcaaactcttagaacaatgc
cgcattttgtctaactggcgtctaaacgaccatcaagtcaaacggagatcatcttttatg
agcaaagcttctgatgtgccacttttggatgaaagaaggaagtgctggacagctcgtgat
cagttttttgcttgtctggatgcaaataaggacgacgaaaagttgtgcaaatctctgaaa
gacgttttcgaagcatcgtgtcggagaacttggcgtcgtcgtatgtttgtgttggcttta
cgtcgacttgttgttgatttgcgttggtttcgtcgatttgaaattgagaaacaatttact
ggtcgcctgttgaaattttgttctacctcaactgatatggatcaagtactccgtacggat
tcgaaatctaaagctttgtaccaaacaattcactcgtacattgtgcacaacgatatcgtg
tccaatgacgattggtattgttttagaacaatgctgttggaaagttcagataagcaaaat
acagttgattgtgcagtgttcagagtactggaagagaattgttattttgagcttggagtc
tcttatatcagttacttgttcgacactggcttggacaatccagttaccattaaacaagca
gtgcatcttttagaacagtgttttttgaaagactttgaacattttcactcaggagtggcc
attcaacttttggaacatatacttgtcatggagaaaagctttccaaattttttcacatac
cagaaggcgatcgttttatgcatgtgtggacattttcaccaatgcttatcgatgtggtcc
agtgttttggactgtccgacgaaacgccgcttgattagcacacttttcattgctgcctgt
cggtacagtaatgttgactcgatttggtccatgcgaatgaagagtccgtacactttgagc
gcttcatgtcacatggagatgtcgaaatatttgaaagagcagctccagcaaaatggcgag
tggagaagtttgcgagaattggcccactatgtgatcttttacggcgaaaaaatcaaatgg
tcagttgattgtggaatcgtaacagacagcggctgttgttcttgttgcagtagtcctttg
aagcagttgacactgtcggatgaagatttcaactcaatgaaagatgaattagttaagcga
attgtcatcggtgacagtgtttaccgtcaaacttcaccagaggaatactaccgttttcga
caaacaaacgacgacgcgtttgtgattgtcgctgcggtgagcagcggcaagcattgttac
atggtgagcaatgaccagctgaatacgcattgtcataaattgaacccaccgcaacgggat
tactttctcctttggcgacggatgcggcagattctcagtgaacaagcagaaccgaatgcc
ccacgtcatagaacgttgcagcgaactgaaattgagaaacgaatgatgagtggtgattca
gaagagcaaaagccgaaatggcttcgcgtgatggacttgcagacgccggtacgtttctcc
gaaactgtacagtcggcgttggattccgtagccgatccggaagatccattcaacaagccc
gacttttgtgccatttcctacatcaatcatttatttccatcagaaccgagtttagcacac
gtcggtcaagtgatggcggatgtgcagcgtcagattgatcaagttgaccaggaaatatcg
gatatattggaaaagcaaagcgtcgcccagttggacagcgaagcgcttttggagcagacc
aagcaggcgatgcgagaattgttcggtcgaataatggacatcaagcgccaaaccgacatg
tccgagacgacggtcaaggagatcacccgcgatatcaggcagttggatttggcgaagaaa
aatttgaccgcttcgataacgacgttgaatcacctgcacatgttggtcagtg
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