Trichinella spiralis: Tsp_01998
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Entry
Tsp_01998 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K08492
syntaxin 18
Organism
tsp
Trichinella spiralis
Pathway
tsp04130
SNARE interactions in vesicular transport
tsp04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Tsp_01998
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
Tsp_01998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_01998
Membrane trafficking [BR:
tsp04131
]
SNARE
Syntaxin (Qa)
Stx-rER
Tsp_01998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin-18_N
CENP-K
SPEF2_D5
Motif
Other DBs
NCBI-GeneID:
10907186
NCBI-ProteinID:
XP_003377777
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MDIHPLFLARTKIIQTTRKGLVNSTASPSVNRNPDIVDFSKQTQALLKDLIELETFISNY
KRNYTAVENLYDISCLVSQQEHLELDRLAVSVIGGCEVMLKKMVQIQEKLTGLGEQRQNH
NEAVLQSLRRILNTLTVNHSAINAASAQRSSRLQVESKLKNLVKANRQYSEKGHEHVKNY
PVSTPNQHADGTEDSVRRRMVVNRALLQEELEKDKERFDVDFDDAEAQKFEMEQLTLKKT
LATEKSDIDKLQAQITKISDLQRTFVENICSQEEVIDKIGQSALSSVEFMRISNNAIRQA
IGKKASDRFWFIVFQPNEGIYSTPYSIMMIDIDTVICKLHLQSTDEKI
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatatacatccgctgtttctggcaaggacgaaaataatccaaacgactcggaaaggg
ctggtgaattcgactgcctcgccttcggttaatagaaaccctgacatcgtcgatttttct
aagcagacgcaagcactgttaaaagatttgatagagttggagacatttatttcaaattat
aagcgcaattatacggccgtagagaatttgtacgatattagttgcttggtgagtcagcaa
gagcatttagagttggacagacttgccgttagtgtgattggcggatgcgaagtgatgctg
aaaaagatggttcaaattcaagaaaagctcacaggattaggggaacaacgtcaaaaccac
aatgaagcagttttgcaaagtttgcggaggattttgaacacgctaactgttaatcacagc
gccataaatgctgccagtgcgcaacgtagctcacgacttcaggttgaatcgaagctgaaa
aatttggtgaaggctaatcgacagtattctgaaaagggtcacgagcatgtgaaaaattat
ccagtgtctacccctaaccagcatgctgatggtacggaagattcggtgcgcaggcgtatg
gtagtaaatcgagcgcttcttcaggaagaattagaaaaagacaaagagcgttttgatgtc
gattttgacgatgccgaggcgcagaaatttgaaatggaacagctgacgttgaagaaaaca
ttagcaaccgagaagagtgacattgacaaattgcaagcgcaaattacgaaaatttctgat
ttgcagcgcacgtttgttgaaaatatatgctctcaggaggaagttatagataagattggt
caaagcgccttgtcatcggtggagttcatgcgcataagcaacaacgctattagacaagct
attggtaaaaaggcaagcgatcgtttttggtttatcgttttccagccaaatgagggtatt
tattcaacgccatattcaattatgatgattgatatagatacggtgatctgtaaattacat
ctccaatcaactgatgagaagatctga
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integrated database retrieval system
