Trichinella spiralis: Tsp_02039
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Entry
Tsp_02039 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K20291
conserved oligomeric Golgi complex subunit 4
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02039
Membrane trafficking [BR:
tsp04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
Tsp_02039
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COG4_m
COG4_C
COG4_N
Sec10_HB
TraG_N
Enolase_N
Motif
Other DBs
NCBI-GeneID:
10907341
NCBI-ProteinID:
XP_003377840
LinkDB
All DBs
Position
Unknown
AA seq
802 aa
AA seq
DB search
MLSELIISFTLLVNAGAVLNFKFRSAEDNFSVEEGYRSFGNNNNFSFIPFIVQFSSDFFP
IDKMLPFDFTNQLDQCRVELDRLNVDASALDTEIRSLLAASSQRARELAGPLVRVEGEIA
AAESDFRQLANVFTSNWTLANGIGARVRRLDTAKIRVVDCMQLVDDALDSRLCVDGVQSS
LAAGQYDRAADQLRRFLGVDAAVRRLASGDGAHDPTSLMLDARDRLRTILVDEFDRADRR
DDNASVERFFKLFPLIGEHELGLAEFGAQLTRRLTDLVQRSLTVVDDSGQPPFVDALRLL
LDWLVRLIDAQQPIVDSCYGPGKLFVLWRLLQAQCDVEAGRILDNFFDHRQFYKKLSLAE
NCLKQSAASRTTVVDPLDLDALLSEITLIRTFVRRKVSIGIGKMPDETAKQKEEKQRLEE
KFQTHLSNCVLNCRMQELLGQYVAIEEYYMRESILKAIRLECRESGTLLSSVVDDCFFII
SKSVRRALATSDVDCICAMLNHACALLETHHLAHLKSRLKLGYPSSVSVECVEKLKNRLK
DDFRNVLLQLNDVDQQKLDSCLGQLDETANKFHSALSDAVDQLVRTSFKPRLRLAVDGFF
NDTHAPSELEFVELESRGLFVENIIGCLQLLLEDLRQSLGERPLAMVHATTASLTADLLE
KATLKGTYNRLGGLLLDKQIRKLAGYWTQFAGWSTRQRFSKLDQIVSLLNVDSVADAQNY
CQSESVTWLLNLAEIRQVLALRIDLPGNEIQIQKDVFYLLKFGQIMYSFYHRRVARVRWI
KADRWLYSIQRGLLVGTLWLVD
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgctttcagagttgataataagttttactttgctggtcaacgctggagcagtattaaat
ttcaaatttcgatcagcggaagataacttttctgtagaagaaggttatagaagttttggt
aataataataatttttcttttattccattcatcgttcaattttcttcagatttttttccc
attgataaaatgttaccgttcgattttaccaatcaactcgaccagtgtcgtgtggagttg
gatcgattgaacgtggacgcgtcggcattggacaccgaaatccggtcgttgttggccgcc
agttcgcaacgggctcgcgaactggccggtccactggtccgggtcgaaggggaaattgcc
gccgccgaatccgactttcgccaactggccaacgtgttcacgtccaactggacactggcc
aacggaatcggcgcccgagtgcgtcggctggacacagcgaaaattcgtgtcgtcgactgc
atgcagttggtcgacgacgcgctcgattcgcgcctctgcgtcgacggtgtccagtcgtcg
ttggccgccggccagtacgaccgagccgccgaccagttgcgccgatttttgggcgtcgac
gccgccgttcgccggctggccagtggcgacggcgctcacgacccgacgtcgttgatgctc
gacgccagagatcgtctgcggacaattttggtcgacgaattcgaccgggccgaccggcga
gacgacaacgcgtcggtcgaacgttttttcaaattgttcccgttgatcggcgaacacgag
ctcggcttggccgaatttggcgcccagttgacgcgccgattgaccgacttggtccagcgc
agtctgactgtagtggacgacagtggtcagccgccgttcgtcgacgctttacgacttttg
ctcgactggctcgttcgactgatcgacgcccaacagccgatcgtcgactcttgctacgga
ccgggcaagttgttcgtcttgtggcgtctgttgcaggcccaatgcgacgtcgaagcggga
cgcattttggacaactttttcgaccacaggcaattttacaaaaaactcagtctagccgaa
aattgtctcaaacagtcggctgccagtcgaacgaccgtcgttgatccgctcgatttggac
gctttgctcagtgaaataactttgatccggacatttgttcgtcgtaaagtgagtattgga
attggtaaaatgccagacgaaacagcgaagcaaaaagaagaaaaacaacgcttggaggaa
aaattccaaacccatctttccaattgtgtgttgaattgtcgcatgcaagaactgctcggc
cagtacgtggcaattgaagagtactacatgcgagagtcgatattgaaggcgattcggctc
gaatgccgcgaatccggcacgttgctttccagcgttgtggacgattgttttttcataatt
agcaaaagtgtccgtcgggcattggcgacgtcggatgtcgactgcatctgcgcgatgttg
aaccatgcttgcgcgttgctggaaacccatcatttggcccatttgaaaagtcgactcaaa
cttggctatccttcatctgtcagtgttgaatgtgtggaaaagttgaagaatcgactgaag
gacgactttcgaaatgttctactccaactgaacgacgttgaccagcagaagctggacagc
tgtttggggcagttggacgagacggcgaacaaattccactcggcgttgtccgacgccgtt
gaccaacttgttcgaacatccttcaagccacgcctacgcttggcggtcgatggctttttc
aacgacacgcacgcgcccagtgagttggagtttgtggaattggaatcgcgcggcttgttt
gtagaaaatatcatcggatgtttgcagctgctgttggaagatttgagacagtcacttgga
gaacgaccgttggccatggtgcatgcgacgacggcgtcgttgaccgcggacttgttggaa
aaggctacactgaagggaacgtacaaccgcctgggcgggcttttgctcgacaagcagatc
cgcaaactagccggatactggacgcagtttgccggttggagcaccaggcaacgcttctca
aaattggaccaaattgtttccctgttgaacgtggattcggtagccgatgcgcaaaattat
tgtcaatccgaaagtgtcacttggttattgaacttggccgaaattcgacaagtgcttgct
ttgagaatcgatctgcccggcaacgagatacaaatacaaaaagatgttttttatctgctg
aaatttggacagattatgtacagtttttaccatcgaagagttgctcgagtaagatggata
aaggcagataggtggctatatagcattcagagaggtttgcttgttggaactctttggctc
gtagactaa
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