Trichinella spiralis: Tsp_02061
Help
Entry
Tsp_02061 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tsp
Trichinella spiralis
Pathway
tsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_02061
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_02061
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02061
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_02061
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
Tsp_02061
Membrane trafficking [BR:
tsp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
Tsp_02061
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
Tsp_02061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
10907355
NCBI-ProteinID:
XP_003377853
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MINVFFLNVGRLLNFDLSFATKSVEVLQEQIALQTAVPVGEQILLLSGGVVLCGQKNLSS
YTSAGTESNPIFVVSRITTKDDIAKDKQLNDREFESIAEIAVEADNELQRLGRTMRCSRE
AVTCCINLAKRIKNMFAQLSNACFRMFDEQHLVYQGWCAVVANLDDTLALFRKRIQRLVR
KRERLANCEAGIRDLLTKLPDILETMKRVPIVEPLVNSKLAHCSPGAVVDLDMSVEKPAA
CFAPKTPTTLFCWIDSLNEEINLYNLKEQIQTDLDSILNPTVQKCLDNWAQVCVFREDDV
KMKKIKGIALRFQQLEGCVEKMKELVTDVNLFCEFVCSREDQMRICNDASVLEGVYGSII
NTLSEMMSKQKATHDTAVRFSEAKAELLDNIRRRLDWVHEVHEYIQTTDREVFIHRERMY
MLHRRLDLLKQLRLAPVLYASSVVEIKRRTILRNQFLDWAGQVSEKAKKLFTEETQHRKN
IAMQLDRHFLRALFPCLDSPFPAFAMDTPESVDSYLPNIDDLHIEQIRTGAPELAPFLQL
GHNKVGLGSTDVDKTDCSGGKMVPSAGRTPLVEEVPFKMATNSPSFFHSMDNVSGTPSSL
NLRSVSEIEICEESLKMKEEESTIEMEKECLPTRSTPITVVPRTRENSRVGSYPMCCSRA
AHSFERLSGGGLGGEMTAECEAFVQRNYKVHPLSPDFISVSPCPTEIQENMLPQVVGSAS
SLTRSLDISTPGSLAHRKLVFDMKRINEQLNNNCSSDAVSLHQRLQSISSTALLLKDSLS
SWKAEFRSLRVDVADELQSVRRSCNEQMELLKANLERSLNHTVNTRISQMKSANKTTSLV
DFHCQVQVCELDSSSSDKSSAVVANDVSSCVEFILSHVSCEVQPQRIGAEKVDRSTQTKL
DCKISVVNIEPGDIVLVVFEPKIESFVVFCLPTTIHVLTESSIKNLDLSKDGSSDQGKWN
FGRVIRKQHCQAKKESNRYKLPTGSKFYRVTVEPIGARNDL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtattttttctcaatgttggacgactgctcaatttcgatttatcctttgcg
acgaaaagtgttgaagtgttgcaagagcaaatcgccttgcaaactgcggtgccggtcggt
gagcagattttgctcctcagcggcggagttgtcctttgtgggcagaagaatttgtcgagc
tatacaagcgccggaaccgagtcgaatccgatatttgtcgtctcccgcatcacaaccaaa
gatgacatagccaaagacaagcagcttaacgacagagaatttgaaagcattgccgagatt
gcagtcgaagcggataatgaattgcaacggttgggtcgtacgatgcgatgcagccgtgaa
gccgtgacttgttgtatcaatttggcaaaaagaatcaagaacatgttcgcccaattgtcg
aacgcctgcttccgcatgttcgacgaacagcatctcgtctaccagggctggtgcgccgtg
gttgcgaatctcgacgacacgttggctttgttccgcaagcggatccaacgactggtacgc
aaacgtgaacgtctggccaactgcgaagccggcatccgggatctgttgaccaaattgccg
gacattttggaaacgatgaaacgcgtaccaatagtcgaaccgttggtcaattccaaattg
gcccactgttcaccgggggcggtggtcgatttggatatgtcggttgaaaagccggccgct
tgtttcgctcccaaaaccccgaccacgttgttctgctggatcgacagtttgaacgaggag
atcaacttgtacaatttgaaagaacaaattcaaaccgacctggattctattctgaatccg
acagtgcagaaatgtttggacaattgggcgcaagtttgtgtttttcgcgaagatgatgtg
aaaatgaaaaaaatcaaaggtatcgcgttgagattccaacaattggaaggttgtgtggaa
aagatgaaagagctcgtgacggatgtgaatttgttctgcgaatttgtctgctcgcgtgaa
gatcagatgcgaatatgcaacgacgcgtccgtactcgaaggggtttacggtagtattatc
aatacgttgtcggagatgatgtcgaagcagaaagctactcacgatacggccgtacgtttc
agcgaagccaaagctgaactgttggacaatataagacgtcgactggactgggtgcacgaa
gtgcacgaatatattcaaactaccgacagggaagttttcattcacagggagcgaatgtac
atgcttcatcgacgattggatctgttgaaacagctacgattggctcctgttttgtacgcg
tcgtcggttgtggaaatcaaacgtcgcacaattttgagaaatcaatttctcgactgggct
gggcaagtttcggaaaaagcgaaaaaactgttcaccgaagaaactcaacatcgaaaaaat
atcgctatgcaattggatcgacactttttgcgcgccctgttcccctgcttggattcgcca
tttcccgctttcgcgatggacactcccgaaagtgtcgactcctatttgccgaacatagac
gatttgcacattgaacagattcgcaccggggctccggaattggcgccatttttacaactt
ggccacaacaaagtcggtcttggttccaccgacgtggacaaaaccgactgcagtggcggt
aaaatggtcccttcggctggtcggacacctctggtcgaagaagtaccatttaaaatggcg
acgaattcgccgtcgtttttccacagcatggataacgtgtccggcacgccgagttcgttg
aatttgaggtcggttagtgaaattgaaatttgtgaagaatcgttgaaaatgaaagaagaa
gaaagcaccattgaaatggagaaagaatgcttgccaacgcgatctacaccaattaccgtc
gtaccacggactcgtgaaaatagcagagtcggctcatatccgatgtgttgttcccgggcg
gcccacagtttcgaacggctgtctggtggtggtcttggtggtgaaatgacggcggaatgc
gaagcgttcgtacaacgcaattacaaagtccatccattgtcgccagatttcatctcagtc
agtccttgtccgactgaaatacaagaaaacatgttaccccaggtcgtcggttcagcttct
tcgttgaccagatcgttggacatcagtacaccgggtagtttggctcatcgtaagctcgtc
ttcgacatgaaacgcatcaacgaacagttgaacaacaattgctcttcggatgcggtcagt
ttgcaccaacgtctgcagtccatctcttcgacggcactgttgttgaaagattcactgtcc
tcttggaaggcggaatttcgctcgttgagagtcgatgtggcagatgagctccaatctgtc
agacgttcttgcaacgaacagatggaattgttgaaagccaacctggagcgcagtttaaat
cacactgtcaacactagaataagccaaatgaaaagtgccaacaaaacaacatcacttgtc
gatttccactgtcaagttcaagtatgcgaattggacagctcttcgagcgacaaaagcagt
gctgttgttgccaacgatgtttccagttgtgtggaatttattctcagtcacgtgagttgt
gaagtgcagccgcagaggattggcgccgaaaaagtcgaccgttcaacgcagaccaagctc
gattgtaaaatatccgtcgtcaatatcgagcctggagatattgtattggtcgttttcgaa
ccgaaaatcgaatcgttcgtcgtgttctgcttgccgaccacaattcacgtactgaccgaa
tcttcaataaaaaatttggacctttcgaaagacggctcctctgaccaaggcaagtggaat
tttggtcgagttataagaaagcagcattgtcaggcgaaaaaggaatccaaccgatacaaa
ctaccgaccggctccaaattttatcgtgttactgtcgaaccaataggtgcgagaaatgac
ttgtaa
DBGET
integrated database retrieval system
