Trichinella spiralis: Tsp_02062
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Entry
Tsp_02062 CDS
T01609
Name
(RefSeq) amyloid A4 extracellular domain protein
KO
K04520
amyloid beta A4 protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tsp01002
]
Tsp_02062
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tsp00535
]
Tsp_02062
00536 Glycosaminoglycan binding proteins [BR:
tsp00536
]
Tsp_02062
Peptidases and inhibitors [BR:
tsp01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
Tsp_02062
Proteoglycans [BR:
tsp00535
]
Cell surface proteoglycans
Others
Tsp_02062
Glycosaminoglycan binding proteins [BR:
tsp00536
]
Heparan sulfate / Heparin
Others
Tsp_02062
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
CENP-B_dimeris
NOA36
Med13_C
Motif
Other DBs
NCBI-GeneID:
10907354
NCBI-ProteinID:
XP_003377852
LinkDB
All DBs
Position
Unknown
AA seq
674 aa
AA seq
DB search
MTYLTRFQAVSGGYAGSAASNHKTKANAFVPQVVFRCGFRNRYMTEDGSWASDPDSRASC
LTGKLDILKYCRKVYWNLTVTNIVESSHFVEVDNWCKDDGYPCKWSFWVKPYRCMVGEFE
SDALLVPKNCHFEHVDDENICKDFDYWNQTAIKNCKRRNSYSVLSFAMLEPCGLDMFSGV
EFVCCPNRDDINADVVNVGRLSIRMQSSRDRDNELYGPAIPNDSEEYPPAVTTTTTTTTR
THSTVPPPALLTTASPKTAADDDEDEDDDEEDYEEDDDDDDDDDAENEAADADNEKSAYL
RVADPEIEHEAYKNALEHLTKVHHKKVSKVMKEWSELENRYQEMKRRDPKHAESFKNEMN
MRFQKTVAALEEENADERHQIEDIHQQRVMANLNEKKRLALKEFHQLYDVAGPPPAHAIL
RTLKAYVRAEEKDRVHLLNHYRHMLRSKPQESIFFKSDVLNKLVDIDRRINATISLLKFH
PEIDKKVRTAIEDFFHTYRRENTPDIAETFPDGYLTSAQYHQLLNIKLTVDQIITLAPSV
KVQRKEITENTIDPVQRQEQTISSLPLRNIHVVEEDISLLNKKQDIVHDFVFQEKSIGKS
ASKYIDHSFIFFSIAGVSLIAAVVCGIFFMRHRANHAGQGFIEVSACTPEERHVANMQIS
GYENPAYKYFEENL
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgacatacttgactcgtttccaagcagtttctggcggttatgcaggaagcgctgcgtcg
aatcataagacgaaggccaatgcatttgtaccgcaggtagttttccgttgtggttttcga
aatcgttacatgaccgaagatggttcttgggccagcgatcccgactcgagggcatcatgc
ctaactggcaaattggacattttgaaatattgccgaaaggtttattggaatttgaccgtg
acaaatattgtcgaatcgagtcattttgtcgaagtggacaattggtgcaaggatgacggc
tatccttgcaaatggtcattttgggtgaaaccgtaccgttgcatggttggtgaattcgaa
agcgacgcactgctggtgccaaaaaattgtcatttcgagcatgtggacgatgaaaatata
tgcaaagatttcgattattggaatcagacggcaatcaaaaattgcaaacgacgcaattcc
tattcggttttgtcgttcgccatgcttgaaccgtgcgggttggacatgttctccggcgtg
gagttcgtatgttgtccgaacagagacgacatcaatgccgatgtggtcaacgttggcaga
ctgtcgatccgcatgcagtcgagcagagatcgtgacaacgaattatacggaccagcaata
ccaaacgacagtgaagaatatccacccgcggtgacaaccaccaccactactactacaaga
actcattctacagtaccaccgcctgctttgctgactacagcatctccgaaaacagccgct
gatgatgatgaagatgaagatgatgatgaagaagattacgaagaagatgatgacgatgac
gacgacgacgatgcagagaacgaagctgcggatgctgacaacgaaaagtccgcctatctt
cgtgttgcggatccagaaattgaacacgaagcgtacaagaatgctttggaacatttgaca
aaagtgcatcacaagaaagtttccaaagtgatgaaagagtggtccgaattggaaaataga
tatcaagaaatgaaaagacgagatccaaagcatgcggaatcatttaaaaatgaaatgaac
atgcgcttccaaaaaactgttgccgcgttggaagaagagaatgcggatgaacgtcatcaa
attgaagacatccaccagcagagggtgatggcgaatttgaacgaaaagaagcgtctggct
ttgaaagaatttcatcagctgtacgacgtggccggaccaccgccggcccacgctatactt
cgcacgttgaaagcctacgtcagggcagaggaaaaggaccgggtgcatcttctcaaccac
taccggcatatgcttcgatccaagccgcaagagagtattttcttcaaatcggatgtgctg
aacaaattggtcgacatcgaccgccgtatcaacgctacgatatcccttttgaaattccat
cccgagatcgacaaaaaagtccgaactgcaatagaagatttcttccacacataccgacgt
gagaatacacccgacatcgcggaaacattcccggatggctatcttacctctgctcagtat
catcagctgttgaatataaaactgactgttgaccaaataatcacccttgcaccttcggtg
aaagtacaacgcaaagaaattactgaaaataccatcgatcctgtacaacgacaagagcag
acaatttctagtttgccacttcgtaatattcatgtagtcgaggaagacattagtctgttg
aacaagaaacaagatattgttcatgattttgtattccaagagaaaagtatcggaaagagt
gcatcgaaatatattgatcacagtttcatattcttttccattgctggagtgtctttgatt
gcggcggtggtttgtggcatatttttcatgcgacacagagcaaatcatgctggacaagga
tttatcgaagtcagcgcatgtacacctgaagaacgacacgtagccaacatgcagattagc
ggctacgaaaatcctgcttataagtattttgaagaaaatttgtga
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integrated database retrieval system
