Trichinella spiralis: Tsp_02083 Help Entry Tsp_02083         CDS       T01609                                  Name (RefSeq) hypothetical protein   KO K20181   vacuolar protein sorting-associated protein 18 Organism tsp  Trichinella spiralis Pathway tsp04140   Autophagy - animal tsp04148   Efferocytosis Brite KEGG Orthology (KO) [BR:tsp00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     Tsp_02083    04148 Efferocytosis     Tsp_02083  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tsp04131]     Tsp_02083 Membrane trafficking [BR:tsp04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     Tsp_02083    Hops complex     Tsp_02083 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf_RING_Vps8_fungal zf-C3HC4 zf-RING_2 zf_RING_Vps8 zf-RING_5 zf-RING_Vps41 YfiO zf-C3HC4_2 zf-rbx1 Motif Other DBs NCBI-GeneID:  10907619 NCBI-ProteinID:  XP_003377955 UniProt:  E5SEB4 LinkDB All DBs Position Unknown AA seq 507 aa AA seqDB search MISVSQKSIVSFHLPNGVNVHQSRLDHLAWIFSSLLACKDEIWRTLIVTWLMQIHLSELR RLNLSFTWYRISGDEENSNSTVERQPLCALDEVKDVILAHPKIFIEMMSSYGEVENLMGC LQLLKNYVELVPLQIQHKRYEEALDSMISAAPKNPNVYLSYFIYLIDSIAYLPSSKLELL FGSLGSVDLLPPLYRLQLHEKDILRIIGYVASKENRMVVKNKFVQNYIFSVFARFAGKSE ADLKPFLEIFHNPCFDIDQALMLVGDFAGPHMVDALKEWQIYYDKSKSQELFPAFENEPT LFDRDGQGLTLFRQQLEISGYIPQSQTASSASSLFSDTEEGTAANLQELVSQFPESTISE DAKDKLLNYLTRVARKVDDIQKTQEEIQEVSLAIKQQLEVQSKGYNIVKPSTMCSSCGSR SSQSDQLLIFPCLHEFHSTCFEKEINYLRSCMSRKNMRSSVCAENVIENINYESESCPFC GDYIANVVDVPFLSSLPDSTQHAQWTH NT seq 1524 nt NT seq  +upstreamnt  +downstreamnt atgatatcggtcagtcagaaatcgatcgtctcttttcacctgcccaacggtgtaaatgta caccaaagccggcttgatcatttagcctggatatttagttctcttttggcgtgcaaggat gaaatttggagaactttaatagttacttggttgatgcaaattcacttgtcagaattgcgt cgtttgaacttatccttcacatggtatagaatttctggcgacgaagagaattcaaattca actgtagaaagacaacccctttgtgcgttggatgaagtgaaagatgttatcctagctcat ccaaaaatattcattgaaatgatgagtagttatggtgaagtggaaaatttgatgggctgt ttacaacttttgaaaaattatgtggaattagttcctttgcaaattcagcataaacgttac gaagaagcgttggactcgatgatcagcgcagcaccgaaaaatccgaatgtatatttgtca tattttatttatttgattgattccattgcttatttgccttcatcaaaattggaattgctt tttggttcgttgggttccgtcgacttactgccaccgttgtatcgtctccagctacatgaa aaagatatattgcgaattattggttacgtggcgtcgaaagagaatcgcatggtggtgaaa aataaatttgtccaaaattatattttttccgtctttgctcgctttgccggtaaaagtgaa gctgatttaaagccttttttggagatttttcacaatccttgcttcgatattgaccaagcg ttgatgcttgttggtgactttgccggtccgcatatggttgacgctttgaaagagtggcaa atttattacgataaatctaaaagtcaagaattgtttcctgcctttgaaaatgaaccaact ttattcgatcgtgatggtcaaggattgactctttttcgacaacagttagaaatatccggt tacattccgcaatctcaaactgcatcttctgcgtcatcattgttcagcgatactgaagaa ggcaccgcggcgaacctgcaggaacttgtatctcagtttccagaatctaccattagtgaa gatgctaaagacaaattgttgaattatcttacaagagttgcacgtaaagttgatgatatt cagaaaacccaagaagaaattcaagaagtttctcttgctattaaacagcagttggaagta caaagcaaaggttataacattgtaaaaccaagcacaatgtgttcttcatgtggctcaaga tcttctcagtcagatcagctgctgatcttcccatgtctgcatgaatttcattctacttgc tttgaaaaagaaattaactatttgcggtcatgtatgtccagaaaaaatatgagatcctca gtatgcgccgaaaatgtaattgaaaatattaattatgaatcggaaagttgtccattctgt ggcgattatattgcaaatgttgttgatgtgccttttctttcttcattgcctgattcaaca cagcacgcccaatggacacattga

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