Trichinella spiralis: Tsp_02099
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Entry
Tsp_02099 CDS
T01609
Name
(RefSeq) GTP-binding protein YPT1
KO
K07920
Ras-related protein Rab-33B
Organism
tsp
Trichinella spiralis
Pathway
tsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_02099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_02099
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tsp04147
]
Tsp_02099
04031 GTP-binding proteins [BR:
tsp04031
]
Tsp_02099
Membrane trafficking [BR:
tsp04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab GTPases
Tsp_02099
Others
Specific organelles associated proteins
Auto phagosome
Tsp_02099
Exosome [BR:
tsp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
Tsp_02099
GTP-binding proteins [BR:
tsp04031
]
Small (monomeric) G-proteins
Rab Family
Rab33
Tsp_02099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
G-alpha
Gtr1_RagA
GTP_EFTU
ATP_bind_1
PduV-EutP
RsgA_GTPase
MMR_HSR1_Xtn
nSTAND3
Thioredoxin_14
CENP-M
AAA_16
AAA_24
Motif
Other DBs
NCBI-GeneID:
10907522
NCBI-ProteinID:
XP_003377939
LinkDB
All DBs
Position
Unknown
AA seq
240 aa
AA seq
DB search
MSVLEASDPKRDSDKTEKMLKESEKADPYQALQQIRVVAHNRRRTFKVIVLGDPGVGKTC
LTFRFCNGRFPSNSTPTIGVDFREKIIDLDGETLRVQFWDTAGQERFQQSMIAHYYRNVN
AVIFVYDVSQISSFRNLIRWIEECQKHNIFGTVPMILIGNKCDLESVVTTEEAQIFADKH
DMPLFLTSAQDDLELNHVESIFMTLAHILQKNKSLHVTTDEERVRLSTNISADSGGYCGC
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttggaagcttcagatcctaaaagggatagtgacaagacggaaaagatgtta
aaagaatcagagaaagcagatccatatcaagctttacaacaaatacgtgttgttgctcat
aatcgtcgacggacattcaaagtaatcgtcttaggcgatcctggggttggaaaaacttgc
ttgacttttcgattttgtaatggaagatttccatcgaattcaactcccactattggagtc
gattttcgcgaaaagatcattgatttggatggtgaaacgttacgggttcagttttgggat
actgctggtcaagaaagatttcagcaatcaatgattgcccattattatagaaatgtaaat
gcagtgatttttgtatatgacgtttctcagatatcatcgtttcgaaatttaattcgttgg
attgaagaatgtcaaaagcacaatatatttggcactgttccgatgattttgataggaaat
aagtgcgatttagaaagtgttgtgacaaccgaagaagctcagatatttgctgataaacat
gacatgcctttgttcttaacatctgctcaggatgatttagaattgaatcatgttgaatcg
atttttatgacgcttgctcacattttgcaaaaaaataaatccttacatgtcactacagat
gaggagagggtacgtctgtcgaccaacatcagtgcagattctggtggctattgcggctgt
tga
DBGET
integrated database retrieval system
